RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 PXMP2Q9NR77 195 aa29.76■■■□□ 2.35
PICALM-215ENST00000531558 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.75■■■□□ 2.35
PICALM-215ENST00000531558 ADAMTS4O75173 837 aa29.75■■■□□ 2.35
PICALM-215ENST00000531558 EIF2AK2P19525 551 aaKnown RBP29.75■■■□□ 2.35
PICALM-215ENST00000531558 TNFAIP2Q03169 654 aa29.75■■■□□ 2.35
PICALM-215ENST00000531558 WWC2Q6AWC2 1192 aa29.75■■■□□ 2.35
PICALM-215ENST00000531558 HTATIP2Q9BUP3 242 aa29.75■■■□□ 2.35
PICALM-215ENST00000531558 KBTBD13C9JR72 458 aa29.74■■■□□ 2.35
PICALM-215ENST00000531558 MYCNP04198 464 aaPredicted RBP29.74■■■□□ 2.35
PICALM-215ENST00000531558 CCT2P78371 535 aaKnown RBP29.74■■■□□ 2.35
PICALM-215ENST00000531558 RNF180Q86T96 592 aa29.74■■■□□ 2.35
PICALM-215ENST00000531558 NCOA5Q9HCD5 579 aaKnown RBP29.74■■■□□ 2.35
PICALM-215ENST00000531558 hCG_1984214I3L0E3 225 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 PIK3CDO00329 1044 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 NTRK3Q16288 839 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 IQSEC1Q6DN90 963 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 PPP1R18Q6NYC8 613 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 FCHSD1Q86WN1 690 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 ZNF713Q8N859 430 aaPredicted RBP29.73■■■□□ 2.35
PICALM-215ENST00000531558 CUL5Q93034 780 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 PDCD2LQ9BRP1 358 aa29.73■■■□□ 2.35
PICALM-215ENST00000531558 GNEQ9Y223 722 aaKnown RBP29.73■■■□□ 2.35
PICALM-215ENST00000531558 RBM47A0AV96 593 aaKnown RBP29.72■■■□□ 2.35
PICALM-215ENST00000531558 NR3C2P08235 984 aa29.72■■■□□ 2.35
PICALM-215ENST00000531558 SMPD1P17405 629 aa29.72■■■□□ 2.35
PICALM-215ENST00000531558 USP17L6PQ6QN14 398 aa29.72■■■□□ 2.35
PICALM-215ENST00000531558 NOL8Q76FK4 1167 aaKnown RBP29.72■■■□□ 2.35
PICALM-215ENST00000531558 UPF3AQ9H1J1 476 aaKnown RBP29.72■■■□□ 2.35
PICALM-215ENST00000531558 PSTPIP2Q9H939 334 aa29.72■■■□□ 2.35
PICALM-215ENST00000531558 MEIS2O14770 477 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 IFNAR1P17181 557 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 AK2P54819 239 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 GJA9P57773 515 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 ANKRD1Q15327 319 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 STXBP2Q15833 593 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 SMARCC2Q8TAQ2 1214 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 SPC25Q9HBM1 224 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 RBM27Q9P2N5 1060 aaKnown RBP29.71■■■□□ 2.35
PICALM-215ENST00000531558 FRMPD4Q14CM0 1322 aa29.71■■■□□ 2.35
PICALM-215ENST00000531558 STXBP3O00186 592 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 PRPF3O43395 683 aaKnown RBP29.7■■■□□ 2.35
PICALM-215ENST00000531558 NAPAP54920 295 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 PFKFB3Q16875 520 aaPredicted RBP29.7■■■□□ 2.35
PICALM-215ENST00000531558 TYW1BQ6NUM6 668 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 TLK2Q86UE8 772 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 KLHDC9Q8NEP7 349 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 SCFD2Q8WU76 684 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 PHKBQ93100 1093 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 WDR11Q9BZH6 1224 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 BARHL2Q9NY43 387 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 TPCN1Q9ULQ1 816 aa29.7■■■□□ 2.35
PICALM-215ENST00000531558 MYADML2A6NDP7 307 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 C6orf222P0C671 652 aaPredicted RBP29.69■■■□□ 2.34
PICALM-215ENST00000531558 SCG2P13521 617 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 CST5P28325 142 aaPredicted RBP29.69■■■□□ 2.34
PICALM-215ENST00000531558 NEK4P51957 841 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 STK3Q13188 491 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 PGM5Q15124 567 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 DUSP28Q4G0W2 176 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 TMEM63BQ5T3F8 832 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 IL31RAQ8NI17 732 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 RNF26Q9BY78 433 aaPredicted RBP29.69■■■□□ 2.34
PICALM-215ENST00000531558 C22orf23Q9BZE7 217 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 SENP6Q9GZR1 1112 aaPredicted RBP29.69■■■□□ 2.34
PICALM-215ENST00000531558 PHF24Q9UPV7 400 aa29.69■■■□□ 2.34
PICALM-215ENST00000531558 EIF3JO75822 258 aaKnown RBP29.68■■■□□ 2.34
PICALM-215ENST00000531558 PTGS1P23219 599 aa29.68■■■□□ 2.34
PICALM-215ENST00000531558 NKX3-2P78367 333 aa29.68■■■□□ 2.34
PICALM-215ENST00000531558 TSEN34Q9BSV6 310 aaKnown RBP29.68■■■□□ 2.34
PICALM-215ENST00000531558 SLC26A6Q9BXS9 759 aa29.68■■■□□ 2.34
PICALM-215ENST00000531558 Q9Y3F1 56 aa29.68■■■□□ 2.34
PICALM-215ENST00000531558 IRX5P78411 483 aaPredicted RBP29.67■■■□□ 2.34
PICALM-215ENST00000531558 AKAP17AQ02040 695 aaKnown RBP29.67■■■□□ 2.34
PICALM-215ENST00000531558 PKN1Q16512 942 aa29.67■■■□□ 2.34
PICALM-215ENST00000531558 VSIG10LQ86VR7 867 aa29.67■■■□□ 2.34
PICALM-215ENST00000531558 DPF3Q92784 378 aa29.67■■■□□ 2.34
PICALM-215ENST00000531558 CPLX1O14810 134 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 CTAGE5O15320 804 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 PPFIA3O75145 1194 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 MYCLP12524 364 aaPredicted RBP29.66■■■□□ 2.34
PICALM-215ENST00000531558 CCND2P30279 289 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 UBE2SQ16763 222 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 CCSAPQ6IQ19 270 aaPredicted RBP29.66■■■□□ 2.34
PICALM-215ENST00000531558 SEPT14Q6ZU15 432 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 TEX2Q8IWB9 1127 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 AP5M1Q9H0R1 490 aa29.66■■■□□ 2.34
PICALM-215ENST00000531558 NKRFO15226 690 aaKnown RBP eCLIP29.65■■■□□ 2.34
PICALM-215ENST00000531558 DYNC1LI2O43237 492 aaPredicted RBP29.65■■■□□ 2.34
PICALM-215ENST00000531558 PFKFB2O60825 505 aa29.65■■■□□ 2.34
PICALM-215ENST00000531558 RBM25P49756 843 aaKnown RBP29.65■■■□□ 2.34
PICALM-215ENST00000531558 ADCY7P51828 1080 aa29.65■■■□□ 2.34
PICALM-215ENST00000531558 SCRN1Q12765 414 aa29.65■■■□□ 2.34
PICALM-215ENST00000531558 TTLL4Q14679 1199 aa29.65■■■□□ 2.34
PICALM-215ENST00000531558 SLKQ9H2G2 1235 aaPredicted RBP29.65■■■□□ 2.34
PICALM-215ENST00000531558 RIC8AQ9NPQ8 531 aa29.65■■■□□ 2.34
PICALM-215ENST00000531558 MOXD2PA6NHM9 499 aa29.64■■■□□ 2.34
PICALM-215ENST00000531558 ARIH2O95376 493 aa29.64■■■□□ 2.34
PICALM-215ENST00000531558 TXNP10599 105 aaKnown RBP29.64■■■□□ 2.34
PICALM-215ENST00000531558 KCNA10Q16322 511 aa29.64■■■□□ 2.34
PICALM-215ENST00000531558 GNASQ5JWF2 1037 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms