RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 HERC6Q8IVU3 1022 aa21.25■□□□□ 0.99
SCN4B-205ENST00000531550 PPP1R13LQ8WUF5 828 aa21.25■□□□□ 0.99
SCN4B-205ENST00000531550 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
SCN4B-205ENST00000531550 PRRC2BQ5JSZ5 2229 aaKnown RBP21.25■□□□□ 0.99
SCN4B-205ENST00000531550 TTC41PQ6P2S7 1318 aa21.25■□□□□ 0.99
SCN4B-205ENST00000531550 RAD50Q92878 1312 aa21.25■□□□□ 0.99
SCN4B-205ENST00000531550 PPP2R5BQ15173 497 aa21.24■□□□□ 0.99
SCN4B-205ENST00000531550 BRDTQ58F21 947 aaPredicted RBP21.24■□□□□ 0.99
SCN4B-205ENST00000531550 SYDE2Q5VT97 1194 aa21.24■□□□□ 0.99
SCN4B-205ENST00000531550 BTNL9Q6UXG8 535 aa21.24■□□□□ 0.99
SCN4B-205ENST00000531550 RETREG2Q8NC44 543 aa21.24■□□□□ 0.99
SCN4B-205ENST00000531550 FTOQ9C0B1 505 aaKnown RBP eCLIP21.24■□□□□ 0.99
SCN4B-205ENST00000531550 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCN4B-205ENST00000531550 TLL1O43897 1013 aa21.23■□□□□ 0.99
SCN4B-205ENST00000531550 RANBP6O60518 1105 aaKnown RBP21.23■□□□□ 0.99
SCN4B-205ENST00000531550 CALML3P27482 149 aa21.23■□□□□ 0.99
SCN4B-205ENST00000531550 PI4K2BQ8TCG2 481 aa21.23■□□□□ 0.99
SCN4B-205ENST00000531550 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
SCN4B-205ENST00000531550 EPHX3Q9H6B9 360 aa21.23■□□□□ 0.99
SCN4B-205ENST00000531550 PTPRSQ13332 1948 aa21.23■□□□□ 0.99
SCN4B-205ENST00000531550 KIF28PB7ZC32 967 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 PTPN11Q06124 597 aaPredicted RBP21.22■□□□□ 0.99
SCN4B-205ENST00000531550 GRB10Q13322 594 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 BFSP2Q13515 415 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 CLEC4DQ8WXI8 215 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 COPS5Q92905 334 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 LRFN3Q9BTN0 628 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 ANAPC4Q9UJX5 808 aa21.22■□□□□ 0.99
SCN4B-205ENST00000531550 FRMPD2Q68DX3 1309 aaPredicted RBP21.22■□□□□ 0.99
SCN4B-205ENST00000531550 A6NJR5 290 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 KPNA6O60684 536 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 BAIAP3O94812 1187 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 EDNRBP24530 442 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 HOXD11P31277 338 aaPredicted RBP21.21■□□□□ 0.99
SCN4B-205ENST00000531550 PDE4DQ08499 809 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 RNF207Q6ZRF8 634 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 SPRED2Q7Z698 418 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 SCFD2Q8WU76 684 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 HLA-CQ95604 372 aa21.21■□□□□ 0.99
SCN4B-205ENST00000531550 ORC4O43929 436 aa21.2■□□□□ 0.98
SCN4B-205ENST00000531550 MPHOSPH6Q99547 160 aaKnown RBP21.2■□□□□ 0.98
SCN4B-205ENST00000531550 GPCPD1Q9NPB8 672 aa21.2■□□□□ 0.98
SCN4B-205ENST00000531550 NOD1Q9Y239 953 aa21.2■□□□□ 0.98
SCN4B-205ENST00000531550 HCN4Q9Y3Q4 1203 aa21.2■□□□□ 0.98
SCN4B-205ENST00000531550 TET1Q8NFU7 2136 aa21.19■□□□□ 0.98
SCN4B-205ENST00000531550 LPXNO60711 386 aa21.19■□□□□ 0.98
SCN4B-205ENST00000531550 PDE4AP27815 886 aa21.19■□□□□ 0.98
SCN4B-205ENST00000531550 RPS6P62753 249 aaKnown RBP21.19■□□□□ 0.98
SCN4B-205ENST00000531550 VPS53Q5VIR6 699 aa21.19■□□□□ 0.98
SCN4B-205ENST00000531550 DNERQ8NFT8 737 aa21.19■□□□□ 0.98
SCN4B-205ENST00000531550 OTUD7AQ8TE49 926 aaPredicted RBP21.19■□□□□ 0.98
SCN4B-205ENST00000531550 TMEM47Q9BQJ4 181 aa21.19■□□□□ 0.98
SCN4B-205ENST00000531550 ARIH1Q9Y4X5 557 aaPredicted RBP21.19■□□□□ 0.98
SCN4B-205ENST00000531550 FGRP09769 529 aa21.18■□□□□ 0.98
SCN4B-205ENST00000531550 TXNP10599 105 aaKnown RBP21.18■□□□□ 0.98
SCN4B-205ENST00000531550 TOP1P11387 765 aaKnown RBP21.18■□□□□ 0.98
SCN4B-205ENST00000531550 KCNJ6P48051 423 aa21.18■□□□□ 0.98
SCN4B-205ENST00000531550 TMEM31Q5JXX7 168 aa21.18■□□□□ 0.98
SCN4B-205ENST00000531550 PNMA2Q9UL42 364 aa21.18■□□□□ 0.98
SCN4B-205ENST00000531550 LCHNA4D1U4 455 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 ARIH2O95376 493 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 WDR5P61964 334 aaKnown RBP21.17■□□□□ 0.98
SCN4B-205ENST00000531550 PTGISQ16647 500 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 CCDC155Q8N6L0 562 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 CAGE1Q8TC20 777 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 AFAP1L1Q8TED9 768 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 TOMM22Q9NS69 142 aa21.17■□□□□ 0.98
SCN4B-205ENST00000531550 WDR19Q8NEZ3 1342 aa21.16■□□□□ 0.98
SCN4B-205ENST00000531550 PDHBP11177 359 aa21.16■□□□□ 0.98
SCN4B-205ENST00000531550 CHMP4BP1P59074 171 aa21.16■□□□□ 0.98
SCN4B-205ENST00000531550 TMCO2Q7Z6W1 182 aaPredicted RBP21.16■□□□□ 0.98
SCN4B-205ENST00000531550 GDPD5Q8WTR4 605 aa21.16■□□□□ 0.98
SCN4B-205ENST00000531550 KHSRPQ92945 711 aaKnown RBP eCLIP21.16■□□□□ 0.98
SCN4B-205ENST00000531550 CTAGE1Q96RT6 745 aa21.16■□□□□ 0.98
SCN4B-205ENST00000531550 SALL3Q9BXA9 1300 aa21.15■□□□□ 0.98
SCN4B-205ENST00000531550 DEFB103AP81534 67 aa21.15■□□□□ 0.98
SCN4B-205ENST00000531550 GPNMBQ14956 572 aa21.15■□□□□ 0.98
SCN4B-205ENST00000531550 RRP12Q5JTH9 1297 aaKnown RBP21.15■□□□□ 0.98
SCN4B-205ENST00000531550 GDF6Q6KF10 455 aaPredicted RBP21.15■□□□□ 0.98
SCN4B-205ENST00000531550 SESTD1Q86VW0 696 aa21.15■□□□□ 0.98
SCN4B-205ENST00000531550 C11orf16Q9NQ32 467 aa21.15■□□□□ 0.98
SCN4B-205ENST00000531550 TCP11L1Q9NUJ3 509 aa21.15■□□□□ 0.98
SCN4B-205ENST00000531550 TRIP12Q14669 1992 aaPredicted RBP21.15■□□□□ 0.98
SCN4B-205ENST00000531550 B4DLN1 442 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 MMP3P08254 477 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 SELPP16109 830 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 MX1P20591 662 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 MRPL12P52815 198 aaKnown RBP21.14■□□□□ 0.97
SCN4B-205ENST00000531550 ZNF543Q08ER8 600 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 ALX1Q15699 326 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 LRRC8DQ7L1W4 858 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 SKAP1Q86WV1 359 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 PLEKHM2Q8IWE5 1019 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 AFG1LQ8WV93 481 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 DHX38Q92620 1227 aaKnown RBP21.14■□□□□ 0.97
SCN4B-205ENST00000531550 OSBPL3Q9H4L5 887 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 LMCD1Q9NZU5 365 aa21.14■□□□□ 0.97
SCN4B-205ENST00000531550 CCDC62Q6P9F0 684 aa21.13■□□□□ 0.97
SCN4B-205ENST00000531550 CNKSR3Q6P9H4 555 aa21.13■□□□□ 0.97
SCN4B-205ENST00000531550 ZBED2Q9BTP6 218 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms