RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZNF576Q9H609 170 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 JMJD4Q9H9V9 463 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 GPHNQ9NQX3 736 aaPredicted RBP15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 MRPL11Q9Y3B7 192 aaKnown RBP15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 LAMA4Q16363 1823 aa15.56■□□□□ 0.08
AMBRA1-210ENST00000531542 TXNP10599 105 aaKnown RBP15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 GSPT1P15170 499 aaKnown RBP15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 PDE4AP27815 886 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 QRICH1Q2TAL8 776 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 USH1GQ495M9 461 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 FBXO11Q86XK2 927 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 RUFY2Q8WXA3 655 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 MYLIPQ8WY64 445 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 PBX4Q9BYU1 374 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 WNT8AQ9H1J5 351 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 IL25Q9H293 177 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 CPVLQ9H3G5 476 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 UNC80Q8N2C7 3258 aa15.55■□□□□ 0.08
AMBRA1-210ENST00000531542 CDH23Q9H251 3354 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 UMODL1Q5DID0 1318 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 ACRP10323 421 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 FOSL2P15408 326 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 TRAF1Q13077 416 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 GRIN2CQ14957 1233 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 RAB30Q15771 203 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 STXBP2Q15833 593 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 VWCEQ96DN2 955 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 AMNQ9BXJ7 453 aa15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 U3KPZ7 1027 aaPredicted RBP15.54■□□□□ 0.08
AMBRA1-210ENST00000531542 PALM3A6NDB9 673 aaPredicted RBP15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 KLRF2D3W0D1 207 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 EIF3JO75822 258 aaKnown RBP15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 MYL3P08590 195 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 HSD17B4P51659 736 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 TRDNQ13061 729 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 NBPF20Q3BBV1 942 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 SESTD1Q86VW0 696 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 TBC1D5Q92609 795 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 EMID1Q96A84 441 aaPredicted RBP15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 TAAR1Q96RJ0 339 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 RMDN3Q96TC7 470 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 COL20A1Q9P218 1284 aa15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 SUPT16HQ9Y5B9 1047 aaKnown RBP15.53■□□□□ 0.08
AMBRA1-210ENST00000531542 ZBTB5O15062 677 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 ARIH2O95376 493 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 GH1P01241 217 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 CHMLP26374 656 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 RFC2P35250 354 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 CCL23P55773 120 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 STOX1Q6ZVD7 989 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 TRMT13Q9NUP7 481 aaKnown RBP15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 CXXC1Q9P0U4 656 aaPredicted RBP15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 MAD2L2Q9UI95 211 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
AMBRA1-210ENST00000531542 OPLAHO14841 1288 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 CYP21A2P08686 494 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 CYB5R4Q7L1T6 521 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 STAG2Q8N3U4 1231 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 COPS5Q92905 334 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 RIOX1Q9H6W3 641 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 PXMP2Q9NR77 195 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 SCN10AQ9Y5Y9 1956 aa15.51■□□□□ 0.07
AMBRA1-210ENST00000531542 SGSM2O43147 1006 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 DHX16O60231 1041 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 NR3C2P08235 984 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 CYP2C9P11712 490 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 CASTP20810 708 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 PBX2P40425 430 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 ARHGAP1Q07960 439 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 ARHGEF16Q5VV41 709 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 OTOP2Q7RTS6 562 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 COL25A1Q9BXS0 654 aaPredicted RBP15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 VAT1LQ9HCJ6 419 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 CHD9Q3L8U1 2897 aa15.5■□□□□ 0.07
AMBRA1-210ENST00000531542 ERICH2A1L162 156 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 GRXCR1A8MXD5 290 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 PPP1R11O60927 126 aaPredicted RBP15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 MMP3P08254 477 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 PTH1RQ03431 593 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 TROAPQ12815 778 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 BFSP2Q13515 415 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 LAMC2Q13753 1193 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 GRM4Q14833 912 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 SART3Q15020 963 aaKnown RBP15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 LY6KQ17RY6 165 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 KCNV1Q6PIU1 500 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 SEPT14Q6ZU15 432 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 NCOA7Q8NI08 942 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 MAP4K1Q92918 833 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 MAP3K14Q99558 947 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 MTA3Q9BTC8 594 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 PCDHA1Q9Y5I3 950 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 SLC4A7Q9Y6M7 1214 aa15.49■□□□□ 0.07
AMBRA1-210ENST00000531542 IFIT3O14879 490 aaKnown RBP15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 CFBP00751 764 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms