RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
NEDD8-206ENST00000531430 GREB1LQ9C091 1923 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-206ENST00000531430 REV3LO60673 3130 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 LCHNA4D1U4 455 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 B4DLN1 442 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 NKRFO15226 690 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEDD8-206ENST00000531430 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-206ENST00000531430 MRPL12P52815 198 aaKnown RBP10.88□□□□□ -0.67
NEDD8-206ENST00000531430 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
NEDD8-206ENST00000531430 USH1GQ495M9 461 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 NFRKBQ6P4R8 1299 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 SCFD2Q8WU76 684 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 DCTPP1Q9H773 170 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 ZBTB47Q9UFB7 747 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-206ENST00000531430 RCAN3Q9UKA8 241 aa10.88□□□□□ -0.67
NEDD8-206ENST00000531430 RBM47A0AV96 593 aaKnown RBP10.87□□□□□ -0.67
NEDD8-206ENST00000531430 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
NEDD8-206ENST00000531430 TOP1P11387 765 aaKnown RBP10.87□□□□□ -0.67
NEDD8-206ENST00000531430 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-206ENST00000531430 PTPN11Q06124 597 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-206ENST00000531430 ZMYM1Q5SVZ6 1142 aa10.87□□□□□ -0.67
NEDD8-206ENST00000531430 GDF6Q6KF10 455 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-206ENST00000531430 ALYREFQ86V81 257 aaKnown RBP10.87□□□□□ -0.67
NEDD8-206ENST00000531430 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
NEDD8-206ENST00000531430 CLEC4DQ8WXI8 215 aa10.87□□□□□ -0.67
NEDD8-206ENST00000531430 TMEM47Q9BQJ4 181 aa10.87□□□□□ -0.67
NEDD8-206ENST00000531430 TRIP12Q14669 1992 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-206ENST00000531430 XIRP2A4UGR9 3374 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 A6NJR5 290 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 SORBS3O60504 671 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 ARIH2O95376 493 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 GOLGA8HP0CJ92 632 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 SELPP16109 830 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
NEDD8-206ENST00000531430 KCNA5P22460 613 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 WDR5P61964 334 aaKnown RBP10.86□□□□□ -0.67
NEDD8-206ENST00000531430 DEFB103AP81534 67 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 IKBKEQ14164 716 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 LY6KQ17RY6 165 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 VPS53Q5VIR6 699 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 LRRC8DQ7L1W4 858 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 C7orf31Q8N865 590 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 OTUD7AQ8TE49 926 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-206ENST00000531430 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 CD320Q9NPF0 282 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEDD8-206ENST00000531430 PLIN4Q96Q06 1357 aa10.86□□□□□ -0.67
NEDD8-206ENST00000531430 DHX16O60231 1041 aaKnown RBP10.85□□□□□ -0.67
NEDD8-206ENST00000531430 LPXNO60711 386 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 GPR37L1O60883 481 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 GH1P01241 217 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 HAND2P61296 217 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 CSPP1Q1MSJ5 1256 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 GJD3Q8N144 294 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 TBC1D5Q92609 795 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 TAAR1Q96RJ0 339 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 TGS1Q96RS0 853 aaKnown RBP10.85□□□□□ -0.67
NEDD8-206ENST00000531430 RAD9AQ99638 391 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 CPVLQ9H3G5 476 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 HDAC6Q9UBN7 1215 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 TRANK1O15050 2925 aa10.85□□□□□ -0.67
NEDD8-206ENST00000531430 TTC41PQ6P2S7 1318 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 LOC102724159A0A0B4J2E5 919 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 PI4K2BG5E9Z4 385 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 CKBP12277 381 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 PWP2Q15269 919 aaKnown RBP10.84□□□□□ -0.67
NEDD8-206ENST00000531430 ARHGEF16Q5VV41 709 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 CNKSR3Q6P9H4 555 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 DHX37Q8IY37 1157 aaKnown RBP10.84□□□□□ -0.67
NEDD8-206ENST00000531430 DNERQ8NFT8 737 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 CAGE1Q8TC20 777 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 ZKSCAN3Q9BRR0 538 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 UBE2ZQ9H832 354 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-206ENST00000531430 LMCD1Q9NZU5 365 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 PNMA2Q9UL42 364 aa10.84□□□□□ -0.67
NEDD8-206ENST00000531430 ABHD14A-ACY1A0A1B0GW23 586 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 ORC4O43929 436 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 NBNO60934 754 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 UPP2O95045 317 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 FGAP02671 866 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 MMP3P08254 477 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 PDHBP11177 359 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 IL9P15248 144 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 PSEN2P49810 448 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 ERVK-21P61565 698 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 ZNF200P98182 395 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-206ENST00000531430 GPNMBQ14956 572 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 STXBP2Q15833 593 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 DGKDQ16760 1214 aa10.83□□□□□ -0.68
NEDD8-206ENST00000531430 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms