RNA–Protein interactions for RNA: ENST00000531131.1

NXF1-208, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2 BASIC

Gene NXF1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-208ENST00000531131 STXBP2Q15833 593 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 NTRK3Q16288 839 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 PFKFB3Q16875 520 aaPredicted RBP13.14□□□□□ -0.31
NXF1-208ENST00000531131 HEATR3Q7Z4Q2 680 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 XPNPEP3Q9NQH7 507 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 BARHL2Q9NY43 387 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 Q9Y3F1 56 aa13.14□□□□□ -0.31
NXF1-208ENST00000531131 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
NXF1-208ENST00000531131 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
NXF1-208ENST00000531131 CDKL5O76039 1030 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 SCG2P13521 617 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
NXF1-208ENST00000531131 AK2P54819 239 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 NKX3-2P78367 333 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
NXF1-208ENST00000531131 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 RNF180Q86T96 592 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
NXF1-208ENST00000531131 HTATIP2Q9BUP3 242 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
NXF1-208ENST00000531131 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
NXF1-208ENST00000531131 KBTBD13C9JR72 458 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 MEIS2O14770 477 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
NXF1-208ENST00000531131 PFKFB2O60825 505 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 STAM2O75886 525 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 NR3C2P08235 984 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
NXF1-208ENST00000531131 NAPAP54920 295 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
NXF1-208ENST00000531131 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
NXF1-208ENST00000531131 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 GPKOWQ92917 476 aaPredicted RBP eCLIP13.12□□□□□ -0.312e-6■■■■■ 30.4
NXF1-208ENST00000531131 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
NXF1-208ENST00000531131 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 TSEN34Q9BSV6 310 aaKnown RBP13.12□□□□□ -0.31
NXF1-208ENST00000531131 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 NCOA5Q9HCD5 579 aaKnown RBP13.12□□□□□ -0.31
NXF1-208ENST00000531131 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 TPCN1Q9ULQ1 816 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 LRRC37A2A6NM11 1700 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 FRMPD4Q14CM0 1322 aa13.12□□□□□ -0.31
NXF1-208ENST00000531131 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 ESYT2A0FGR8 921 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 STXBP3O00186 592 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 COL6A1P12109 1028 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 ADCYAP1R1P41586 468 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 GJA9P57773 515 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 PGM5Q15124 567 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 LRRC41Q15345 812 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 PKN1Q16512 942 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 KCNV1Q6PIU1 500 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 KIF2CQ99661 725 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 UPF3AQ9H1J1 476 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 EHMT1Q9H9B1 1298 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
NXF1-208ENST00000531131 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
NXF1-208ENST00000531131 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 ADAMTS4O75173 837 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 PGK1P00558 417 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 TGFB3P10600 412 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 SMPD1P17405 629 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 GNA11P29992 359 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 CCND2P30279 289 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 ADCY7P51828 1080 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 SCRN1Q12765 414 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 STK3Q13188 491 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 RABEP1Q15276 862 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 GJC2Q5T442 439 aaPredicted RBP13.1□□□□□ -0.31
NXF1-208ENST00000531131 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
NXF1-208ENST00000531131 KLHDC9Q8NEP7 349 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
NXF1-208ENST00000531131 DIS3LQ8TF46 1054 aaKnown RBP13.1□□□□□ -0.31
NXF1-208ENST00000531131 PHKBQ93100 1093 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms