RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 ANKLE1Q8NAG6 615 aa13.69□□□□□ -0.22
LTBP3-219ENST00000530990 NSUN6Q8TEA1 469 aaKnown RBP13.69□□□□□ -0.22
LTBP3-219ENST00000530990 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
LTBP3-219ENST00000530990 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
LTBP3-219ENST00000530990 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
LTBP3-219ENST00000530990 FAM184BQ9ULE4 1060 aa13.69□□□□□ -0.22
LTBP3-219ENST00000530990 SYNRGQ9UMZ2 1314 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 DOCK5Q9H7D0 1870 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 hCG_1984214I3L0E3 225 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 STXBP3O00186 592 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 MEIS2O14770 477 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 PGK1P00558 417 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 SCG2P13521 617 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 IFNAR1P17181 557 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 CAPN2P17655 700 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 PTGS1P23219 599 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 NAPAP54920 295 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 SCRN1Q12765 414 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 GJC2Q5T442 439 aaPredicted RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 ARHGEF16Q5VV41 709 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 ZNF713Q8N859 430 aaPredicted RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 IL31RAQ8NI17 732 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 PAWRQ96IZ0 340 aaKnown RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 MPHOSPH6Q99547 160 aaKnown RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 RNF26Q9BY78 433 aaPredicted RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
LTBP3-219ENST00000530990 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
LTBP3-219ENST00000530990 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 B4DLN1 442 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 CPLX1O14810 134 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 PRPF3O43395 683 aaKnown RBP13.67□□□□□ -0.22
LTBP3-219ENST00000530990 ADAMTS4O75173 837 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 SLC34A2O95436 690 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
LTBP3-219ENST00000530990 MRPL12P52815 198 aaKnown RBP13.67□□□□□ -0.22
LTBP3-219ENST00000530990 PGM5Q15124 567 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 LRRC41Q15345 812 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 PKN1Q16512 942 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 UBE2SQ16763 222 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 TMEM63BQ5T3F8 832 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 PPP1R18Q6NYC8 613 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 CUL5Q93034 780 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 IWS1Q96ST2 819 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
LTBP3-219ENST00000530990 PSTPIP2Q9H939 334 aa13.67□□□□□ -0.22
LTBP3-219ENST00000530990 RBM27Q9P2N5 1060 aaKnown RBP13.67□□□□□ -0.22
LTBP3-219ENST00000530990 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 DNM1LO00429 736 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 PFKFB2O60825 505 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 DUSP11O75319 330 aaKnown RBP13.66□□□□□ -0.22
LTBP3-219ENST00000530990 NR3C2P08235 984 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 SMPD1P17405 629 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 ADCY7P51828 1080 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
LTBP3-219ENST00000530990 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
LTBP3-219ENST00000530990 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 ME3Q16798 604 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 TLK2Q86UE8 772 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
LTBP3-219ENST00000530990 GNEQ9Y223 722 aaKnown RBP13.66□□□□□ -0.22
LTBP3-219ENST00000530990 RBM47A0AV96 593 aaKnown RBP13.65□□□□□ -0.22
LTBP3-219ENST00000530990 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 DTNBO60941 627 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 COL6A1P12109 1028 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
LTBP3-219ENST00000530990 STXBP2Q15833 593 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 ARRDC4Q8NCT1 418 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
LTBP3-219ENST00000530990 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 BACH2Q9BYV9 841 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
LTBP3-219ENST00000530990 RIC8AQ9NPQ8 531 aa13.65□□□□□ -0.22
LTBP3-219ENST00000530990 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 RGS20O76081 388 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 ARIH2O95376 493 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 C6orf222P0C671 652 aaPredicted RBP13.64□□□□□ -0.23
LTBP3-219ENST00000530990 CCND2P30279 289 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 GJA9P57773 515 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
LTBP3-219ENST00000530990 ST3GAL1Q11201 340 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 DUSP28Q4G0W2 176 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
LTBP3-219ENST00000530990 SEPT14Q6ZU15 432 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 RNF180Q86T96 592 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 SCFD2Q8WU76 684 aa13.64□□□□□ -0.23
LTBP3-219ENST00000530990 VPS54Q9P1Q0 977 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms