RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 FRMPD4Q14CM0 1322 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 SYNGAP1Q96PV0 1343 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 POTEFA5A3E0 1075 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 ASB14A6NK59 587 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 M0R2N6 131 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 DTNBO60941 627 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 FOSP01100 380 aaPredicted RBP18.41■□□□□ 0.54
BRK1-201ENST00000530758 HOXA13P31271 388 aaPredicted RBP18.41■□□□□ 0.54
BRK1-201ENST00000530758 ALDH5A1P51649 535 aaPredicted RBP18.41■□□□□ 0.54
BRK1-201ENST00000530758 ADCY7P51828 1080 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 HSCBQ8IWL3 235 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 BICD2Q8TD16 824 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
BRK1-201ENST00000530758 ZNF333Q96JL9 665 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 PCDHA4Q9UN74 947 aa18.41■□□□□ 0.54
BRK1-201ENST00000530758 KIAA0100Q14667 2235 aaKnown RBP18.41■□□□□ 0.54
BRK1-201ENST00000530758 B4DLN1 442 aa18.4■□□□□ 0.54
BRK1-201ENST00000530758 HMGCRP04035 888 aa18.4■□□□□ 0.54
BRK1-201ENST00000530758 AP3B2Q13367 1082 aa18.4■□□□□ 0.54
BRK1-201ENST00000530758 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
BRK1-201ENST00000530758 PXMP2Q9NR77 195 aa18.4■□□□□ 0.54
BRK1-201ENST00000530758 RPTORQ8N122 1335 aa18.4■□□□□ 0.54
BRK1-201ENST00000530758 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
BRK1-201ENST00000530758 ELNP15502 786 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 NLRP5P59047 1200 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 FBXO18Q8NFZ0 1043 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 MPHOSPH6Q99547 160 aaKnown RBP18.39■□□□□ 0.53
BRK1-201ENST00000530758 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 KIF3AQ9Y496 699 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 LRRC37A2A6NM11 1700 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 KIAA1217Q5T5P2 1943 aa18.39■□□□□ 0.53
BRK1-201ENST00000530758 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 GJB2P29033 226 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 UBE2SQ16763 222 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 VSIG10LQ86VR7 867 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 FCHSD1Q86WN1 690 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 BLIDQ8IZY5 108 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 SH3TC2Q8TF17 1288 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 PDCD2LQ9BRP1 358 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 GJB4Q9NTQ9 266 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 PCDHA6Q9UN73 950 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 PCDHA8Q9Y5H6 950 aa18.38■□□□□ 0.53
BRK1-201ENST00000530758 SPDYE3A6NKU9 549 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 MMP1P03956 469 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 NR3C2P08235 984 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 CACNB2Q08289 660 aaPredicted RBP18.37■□□□□ 0.53
BRK1-201ENST00000530758 PGM5Q15124 567 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 SLC9C1Q4G0N8 1177 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 ARHGEF16Q5VV41 709 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 KRT40Q6A162 431 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 XRRA1Q6P2D8 792 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 REXO1Q8N1G1 1221 aaKnown RBP18.37■□□□□ 0.53
BRK1-201ENST00000530758 CRYGNQ8WXF5 182 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 ABHD16BQ9H3Z7 469 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.37■□□□□ 0.53
BRK1-201ENST00000530758 BIN2Q9UBW5 565 aaPredicted RBP18.37■□□□□ 0.53
BRK1-201ENST00000530758 KCNJ14Q9UNX9 436 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 MKI67P46013 3256 aaKnown RBP18.37■□□□□ 0.53
BRK1-201ENST00000530758 MYH7BA7E2Y1 1941 aa18.37■□□□□ 0.53
BRK1-201ENST00000530758 CYP2C19P33261 490 aa18.36■□□□□ 0.53
BRK1-201ENST00000530758 TRIM32Q13049 653 aa18.36■□□□□ 0.53
BRK1-201ENST00000530758 PDE4DIPQ5VU43 2346 aa18.36■□□□□ 0.53
BRK1-201ENST00000530758 C8orf76Q96K31 380 aa18.36■□□□□ 0.53
BRK1-201ENST00000530758 RBM47A0AV96 593 aaKnown RBP18.35■□□□□ 0.53
BRK1-201ENST00000530758 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
BRK1-201ENST00000530758 STAM2O75886 525 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 INHAP05111 366 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 ZNF865P0CJ78 1059 aaPredicted RBP18.35■□□□□ 0.53
BRK1-201ENST00000530758 CYBAP13498 195 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 SREBF1P36956 1147 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 UBXN2AP68543 259 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 TRIM29Q14134 588 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 STXBP2Q15833 593 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 TNFRSF25Q93038 417 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 ANO3Q9BYT9 981 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 EHMT1Q9H9B1 1298 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 TMEM260Q9NX78 707 aa18.35■□□□□ 0.53
BRK1-201ENST00000530758 CYP3A4P08684 503 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 PRKAR2AP13861 404 aaKnown RBP18.34■□□□□ 0.53
BRK1-201ENST00000530758 EIF2AK2P19525 551 aaKnown RBP18.34■□□□□ 0.53
BRK1-201ENST00000530758 MRPS9P82933 396 aaKnown RBP18.34■□□□□ 0.53
BRK1-201ENST00000530758 PDE4DQ08499 809 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 TAPT1Q6NXT6 567 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 TRPV1Q8NER1 839 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
BRK1-201ENST00000530758 EN2P19622 333 aaPredicted RBP18.33■□□□□ 0.52
BRK1-201ENST00000530758 CCND2P30279 289 aa18.33■□□□□ 0.52
BRK1-201ENST00000530758 KRT2P35908 639 aa18.33■□□□□ 0.52
BRK1-201ENST00000530758 BECN1Q14457 450 aa18.33■□□□□ 0.52
BRK1-201ENST00000530758 PRAMEF19Q5SWL8 479 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms