RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 LARSQ9P2J5 1176 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 DBNLQ9UJU6 430 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 FAM170AA1A519 330 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 ERVV-1B6SEH8 477 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 CCNA1P78396 465 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 SH2D4BQ5SQS7 431 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 ANKRD20A3Q5VUR7 823 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 SUGCTQ9HAC7 445 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
CTNND1-227ENST00000530748 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 MMP1P03956 469 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 MYL1P05976 194 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 LMNB2Q03252 620 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 KCTD2Q14681 263 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 SLC39A14Q15043 492 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 ZNF827Q17R98 1081 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 MAP3K21Q5TCX8 1036 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 SPATS2Q86XZ4 545 aaKnown RBP9.25□□□□□ -0.93
CTNND1-227ENST00000530748 NME8Q8N427 588 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 PPP1R13BQ96KQ4 1090 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 GSDMAQ96QA5 445 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 SERPINB2P05120 415 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 GNGT1P63211 74 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 APBA1Q02410 837 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 PTK2Q05397 1052 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 GPR162Q16538 588 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 NT5C1BQ96P26 610 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 RABEP2Q9H5N1 569 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 TMEM206Q9H813 350 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 LAMC1P11047 1609 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 HEG1Q9ULI3 1381 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 CHD1O14646 1710 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-227ENST00000530748 SRGAP2BP0DMP2 458 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 KRT3P12035 628 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 EEF1GP26641 437 aaKnown RBP9.25□□□□□ -0.93
CTNND1-227ENST00000530748 IRX4P78413 519 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 ODR4Q5SWX8 454 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 KAZNQ674X7 775 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 RSPH3Q86UC2 560 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 TRMT2AQ8IZ69 625 aaKnown RBP9.25□□□□□ -0.93
CTNND1-227ENST00000530748 P2RX5Q93086 422 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 RPS6KC1Q96S38 1066 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 DPH5Q9H2P9 285 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 ASAP1Q9ULH1 1129 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 AKT3Q9Y243 479 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 ATP8B3O60423 1300 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 SPATA31E1Q6ZUB1 1445 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 PTPREP23469 700 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 METTL23Q86XA0 190 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
CTNND1-227ENST00000530748 KLHL14Q9P2G3 628 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 MBD5Q9P267 1494 aa9.25□□□□□ -0.93
CTNND1-227ENST00000530748 PRPF3O43395 683 aaKnown RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 ABL1P00519 1130 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 RASSF7Q02833 373 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 IFRD2Q12894 506 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 SEPT2Q15019 361 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 ZNF772Q68DY9 489 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 NXNQ6DKJ4 435 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 LCORLQ8N3X6 602 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 NSUN7Q8NE18 718 aaKnown RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 WDR11Q9BZH6 1224 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 THAP9Q9H5L6 903 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 HOMER3Q9NSC5 361 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 RWDD2AQ9UIY3 292 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 MAN1B1Q9UKM7 699 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 A0A1B0GUA9 196 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 H2AFZP0C0S5 128 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 STAT2P52630 851 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 RBL2Q08999 1139 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 PLCB4Q15147 1175 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 FAM196AQ6ZSG2 479 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 H2AFVQ71UI9 128 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 ZNF589Q86UQ0 364 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 ARHGEF25Q86VW2 580 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 CACTINQ8WUQ7 758 aaKnown RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 PIGSQ96S52 555 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 TUBGCP2Q9BSJ2 902 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 IFT122Q9HBG6 1241 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 DISC1Q9NRI5 854 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 ARAP3Q8WWN8 1544 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 MAP3K4Q9Y6R4 1608 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 CLRN2A0PK11 232 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 HGSO14964 777 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 MED7O43513 233 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 BBOX1O75936 387 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 MAP7D3Q8IWC1 876 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 DHX36Q9H2U1 1008 aaKnown RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 USH1CQ9Y6N9 552 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 IQGAP3Q86VI3 1631 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 RPAP1Q9BWH6 1393 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-227ENST00000530748 CROCC2H7BZ55 1655 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 APOA5Q6Q788 366 aa9.24□□□□□ -0.93
CTNND1-227ENST00000530748 CDKL2Q92772 493 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms