RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 ACLYP53396 1101 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 KCNA10Q16322 511 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 RTN1Q16799 776 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 ARHGEF16Q5VV41 709 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 TLK2Q86UE8 772 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 CCDC82Q8N4S0 544 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 PCSK9Q8NBP7 692 aaKnown RBP17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 PXMP2Q9NR77 195 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 Q9Y3F1 56 aa17.27■□□□□ 0.36
PPFIA1-216ENST00000530746 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 CTAGE5O15320 804 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 EIF2AK2P19525 551 aaKnown RBP17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 APOBRQ0VD83 1088 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 SNX17Q15036 470 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 STXBP2Q15833 593 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 DUSP28Q4G0W2 176 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 GNASQ5JWF2 1037 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 TMEM63BQ5T3F8 832 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 C1orf53Q5VUE5 145 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 RUFY3Q7L099 469 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 BRF1Q92994 677 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 AGXT2Q9BYV1 514 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 AP5M1Q9H0R1 490 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
PPFIA1-216ENST00000530746 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
PPFIA1-216ENST00000530746 RTP1P59025 263 aa17.25■□□□□ 0.35
PPFIA1-216ENST00000530746 PPP2R5BQ15173 497 aa17.25■□□□□ 0.35
PPFIA1-216ENST00000530746 TM6SF1Q9BZW5 370 aa17.25■□□□□ 0.35
PPFIA1-216ENST00000530746 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
PPFIA1-216ENST00000530746 CNTNAP5Q8WYK1 1306 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 ASGR1P07306 291 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 NR3C2P08235 984 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 PTGS1P23219 599 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 BEX3Q00994 111 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 FUT2Q10981 343 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 FSCN1Q16658 493 aaKnown RBP17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 FCHSD1Q86WN1 690 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 GLT1D1Q96MS3 346 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 STARD7Q9NQZ5 370 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 FAM217BQ9NTX9 383 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 ZMYND8Q9ULU4 1186 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 ATP11BQ9Y2G3 1177 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 RANBP2P49792 3224 aaKnown RBP17.24■□□□□ 0.35
PPFIA1-216ENST00000530746 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 NKRFO15226 690 aaKnown RBP eCLIP17.23■□□□□ 0.354e-14■□□□□ 9.8
PPFIA1-216ENST00000530746 EIF5BO60841 1220 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 EIF3JO75822 258 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 TXNP10599 105 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 CDC27P30260 824 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 TTLL4Q14679 1199 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 PGM5Q15124 567 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 TRIM60Q495X7 471 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 PDCD2LQ9BRP1 358 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 NID2Q14112 1375 aa17.23■□□□□ 0.35
PPFIA1-216ENST00000530746 ELP1O95163 1332 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 ZEB2O60315 1214 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 SYN1P17600 705 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 ADD1P35611 737 aaKnown RBP17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 EVCP57679 992 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 CUL5Q93034 780 aa17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 COLQQ9Y215 455 aaPredicted RBP17.22■□□□□ 0.35
PPFIA1-216ENST00000530746 MEIS2O14770 477 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 ARIH2O95376 493 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 CCDC62Q6P9F0 684 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 VSIG10LQ86VR7 867 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 PSTPIP2Q9H939 334 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 LTBP2Q14767 1821 aa17.21■□□□□ 0.35
PPFIA1-216ENST00000530746 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.34
PPFIA1-216ENST00000530746 CABYRO75952 493 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 CCND2P30279 289 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 CPT1AP50416 773 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 ANAPC15P60006 121 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 TLE2Q04725 743 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 CXCL17Q6UXB2 119 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 IL31RAQ8NI17 732 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 COPS5Q92905 334 aa17.2■□□□□ 0.34
PPFIA1-216ENST00000530746 VTI1AQ96AJ9 217 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms