RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TMEM67Q5HYA8 995 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 ZNF589Q86UQ0 364 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-219ENST00000530495 PHOSPHO2Q8TCD6 241 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 ADAMTS19Q8TE59 1207 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 MAF1Q9H063 256 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-219ENST00000530495 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
CAPN1-219ENST00000530495 NMIQ13287 307 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-219ENST00000530495 GPATCH4Q5T3I0 446 aaKnown RBP17.52■□□□□ 0.4
CAPN1-219ENST00000530495 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
CAPN1-219ENST00000530495 COPS5Q92905 334 aa17.52■□□□□ 0.4
CAPN1-219ENST00000530495 CCDC171Q6TFL3 1326 aa17.51■□□□□ 0.39
CAPN1-219ENST00000530495 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
CAPN1-219ENST00000530495 DGKHQ86XP1 1220 aa17.51■□□□□ 0.39
CAPN1-219ENST00000530495 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
CAPN1-219ENST00000530495 RNF41Q9H4P4 317 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-219ENST00000530495 REV3LO60673 3130 aa17.51■□□□□ 0.39
CAPN1-219ENST00000530495 TRANK1O15050 2925 aa17.51■□□□□ 0.39
CAPN1-219ENST00000530495 ARIH2O95376 493 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 CA3P07451 260 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 GOLGA8HP0CJ92 632 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
CAPN1-219ENST00000530495 BFSP2Q13515 415 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 PPP1R13LQ8WUF5 828 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 ESR2Q92731 530 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 UHRF1Q96T88 793 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-219ENST00000530495 UBA5Q9GZZ9 404 aa17.5■□□□□ 0.39
CAPN1-219ENST00000530495 TRIP12Q14669 1992 aaPredicted RBP17.49■□□□□ 0.39
CAPN1-219ENST00000530495 MUC3AQ02505 3323 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 BMP1P13497 986 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 COL9A1P20849 921 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 NT5C2P49902 561 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
CAPN1-219ENST00000530495 USH1GQ495M9 461 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 IL27Q8NEV9 243 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 CRBNQ96SW2 442 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 ZKSCAN3Q9BRR0 538 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
CAPN1-219ENST00000530495 MTCH2Q9Y6C9 303 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 TANC1Q9C0D5 1861 aa17.49■□□□□ 0.39
CAPN1-219ENST00000530495 RFXAPO00287 272 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 ZNF213O14771 459 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 SDSP20132 328 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 PTGISQ16647 500 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 AAK1Q2M2I8 961 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 CCDC178Q5BJE1 867 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 SESTD1Q86VW0 696 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 HERC6Q8IVU3 1022 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 NSUN6Q8TEA1 469 aaKnown RBP17.48■□□□□ 0.39
CAPN1-219ENST00000530495 AFG1LQ8WV93 481 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 TAAR1Q96RJ0 339 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 IWS1Q96ST2 819 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 NOD1Q9Y239 953 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
CAPN1-219ENST00000530495 ABCB11O95342 1321 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 NEDD4P46934 1319 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 GTPBP6O43824 516 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-219ENST00000530495 BAIAP3O94812 1187 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 TAP1Q03518 808 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 ARHGAP1Q07960 439 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 CDC37Q16543 378 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-219ENST00000530495 LY6KQ17RY6 165 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 MICALL1Q8N3F8 863 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 SYTL5Q8TDW5 730 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-219ENST00000530495 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 CERS4Q9HA82 394 aa17.47■□□□□ 0.39
CAPN1-219ENST00000530495 TCF20Q9UGU0 1960 aaKnown RBP17.47■□□□□ 0.39
CAPN1-219ENST00000530495 GH1P01241 217 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 MMP3P08254 477 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 TFF2Q03403 129 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 GPNMBQ14956 572 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 STXBP2Q15833 593 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 GDF6Q6KF10 455 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-219ENST00000530495 SEPT14Q6ZU15 432 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 MCF2L2Q86YR7 1114 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 CAGE1Q8TC20 777 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 KAT2BQ92831 832 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 COL20A1Q9P218 1284 aa17.46■□□□□ 0.39
CAPN1-219ENST00000530495 MYH6P13533 1939 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 EPOPA6NHQ4 379 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 KDM4AO75164 1064 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
CAPN1-219ENST00000530495 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 ASPRV1Q53RT3 343 aa17.45■□□□□ 0.38
CAPN1-219ENST00000530495 ZSCAN10Q96SZ4 725 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-219ENST00000530495 RMDN3Q96TC7 470 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms