RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 DIAPH3Q9NSV4 1193 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 MSRAQ9UJ68 235 aa24.31■■□□□ 1.48
TSPAN4-219ENST00000530404 NUCB1Q02818 461 aa24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 NBPF20Q3BBV1 942 aa24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 GPATCH4Q5T3I0 446 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 DNERQ8NFT8 737 aa24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 EXOC6Q8TAG9 804 aa24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 MTIF3Q9H2K0 278 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 OSBPL3Q9H4L5 887 aa24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 GPHNQ9NQX3 736 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 TCF20Q9UGU0 1960 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-219ENST00000530404 ZBBXA8MT70 800 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 RAB30Q15771 203 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 DEFB128Q7Z7B8 93 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 DGKHQ86XP1 1220 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 SCFD2Q8WU76 684 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 MPHOSPH6Q99547 160 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 KAT14Q9H8E8 782 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 PNMA2Q9UL42 364 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 DOCK5Q9H7D0 1870 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 MUC3AQ02505 3323 aa24.29■■□□□ 1.48
TSPAN4-219ENST00000530404 TXNP10599 105 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 MYOGP15173 224 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 CHMP4BP1P59074 171 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 ADGRE1Q14246 886 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 IQCA1Q86XH1 822 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 RPUSD2Q8IZ73 545 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 ADGRF4Q8IZF3 695 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 TAAR1Q96RJ0 339 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 COL20A1Q9P218 1284 aa24.28■■□□□ 1.48
TSPAN4-219ENST00000530404 NKRFO15226 690 aaKnown RBP eCLIP24.27■■□□□ 1.481e-6■■■■□ 19.3
TSPAN4-219ENST00000530404 TTLL4Q14679 1199 aa24.27■■□□□ 1.48
TSPAN4-219ENST00000530404 ENAHQ8N8S7 591 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-219ENST00000530404 ZSCAN10Q96SZ4 725 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-219ENST00000530404 VAT1LQ9HCJ6 419 aa24.27■■□□□ 1.48
TSPAN4-219ENST00000530404 SLC4A7Q9Y6M7 1214 aa24.27■■□□□ 1.48
TSPAN4-219ENST00000530404 RAD50Q92878 1312 aa24.27■■□□□ 1.48
TSPAN4-219ENST00000530404 TTC28Q96AY4 2481 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 SUPT20HL2P0C7V6 817 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 IGFBP4P22692 258 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 AAMPQ13685 434 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 CCDC85BQ15834 202 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 BRDTQ58F21 947 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 SEPT14Q6ZU15 432 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 IL25Q9H293 177 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 SLC28A3Q9HAS3 691 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 ZSWIM5Q9P217 1185 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 ABCB11O95342 1321 aa24.26■■□□□ 1.47
TSPAN4-219ENST00000530404 A6NJR5 290 aa24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 DHX16O60231 1041 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 LY6KQ17RY6 165 aa24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 QRICH1Q2TAL8 776 aa24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 SYTL5Q8TDW5 730 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 DSCC1Q9BVC3 393 aa24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 XIRP2A4UGR9 3374 aa24.25■■□□□ 1.47
TSPAN4-219ENST00000530404 IMMTQ16891 758 aaKnown RBP24.24■■□□□ 1.47
TSPAN4-219ENST00000530404 ASPRV1Q53RT3 343 aa24.24■■□□□ 1.47
TSPAN4-219ENST00000530404 CCDC178Q5BJE1 867 aa24.24■■□□□ 1.47
TSPAN4-219ENST00000530404 RGS22Q8NE09 1264 aa24.24■■□□□ 1.47
TSPAN4-219ENST00000530404 ANKS1AQ92625 1134 aa24.24■■□□□ 1.47
TSPAN4-219ENST00000530404 B4DLN1 442 aa24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 RBAK-RBAKDNI3L0D1 243 aa24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 PARP1P09874 1014 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 MRPL12P52815 198 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 NFRKBQ6P4R8 1299 aa24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 CHST3Q7LGC8 479 aa24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 AFG1LQ8WV93 481 aa24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 JMJD4Q9H9V9 463 aa24.23■■□□□ 1.47
TSPAN4-219ENST00000530404 PRRC2BQ5JSZ5 2229 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 COL4A4P53420 1690 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 HIP1O00291 1037 aa24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 ATP2A2P16615 1042 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 TJAP1Q5JTD0 557 aa24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 PPP2R2DQ66LE6 453 aa24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 CCDC62Q6P9F0 684 aa24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 FBXO11Q86XK2 927 aa24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 STAG2Q8N3U4 1231 aa24.22■■□□□ 1.47
TSPAN4-219ENST00000530404 KPNA6O60684 536 aa24.21■■□□□ 1.47
TSPAN4-219ENST00000530404 MMP3P08254 477 aa24.21■■□□□ 1.47
TSPAN4-219ENST00000530404 EIF2AK2P19525 551 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-219ENST00000530404 NSUN6Q8TEA1 469 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-219ENST00000530404 RMDN3Q96TC7 470 aa24.21■■□□□ 1.47
TSPAN4-219ENST00000530404 PCDHA11Q9Y5I1 949 aa24.21■■□□□ 1.47
TSPAN4-219ENST00000530404 PFKMP08237 780 aa24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 IQCF3P0C7M6 154 aa24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 ARHGAP1Q07960 439 aa24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 SYMPKQ92797 1274 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 UBAC1Q9BSL1 405 aa24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 KRT23Q9C075 422 aa24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 MRPL11Q9Y3B7 192 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-219ENST00000530404 CFBP00751 764 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 GH1P01241 217 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 STXBP2Q15833 593 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 IFIT1BQ5T764 474 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 ARHGEF16Q5VV41 709 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 CYB5R4Q7L1T6 521 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 MCF2L2Q86YR7 1114 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 MICALL1Q8N3F8 863 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 RETREG2Q8NC44 543 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms