RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 RBM47A0AV96 593 aaKnown RBP14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 ADAMTS4O75173 837 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 PGK1P00558 417 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 ADCYAP1R1P41586 468 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 ARHGEF16Q5VV41 709 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 LENG1Q96BZ8 264 aaPredicted RBP14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 HTATIP2Q9BUP3 242 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
CCDC90B-216ENST00000529856 LRRC37A2A6NM11 1700 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 KBTBD13C9JR72 458 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 PIK3CDO00329 1044 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 SMPD1P17405 629 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 GJA9P57773 515 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 CCT2P78371 535 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 STXBP2Q15833 593 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 NTRK3Q16288 839 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 HEATR3Q7Z4Q2 680 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 RNF180Q86T96 592 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 FCHSD1Q86WN1 690 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 KLHDC9Q8NEP7 349 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 GPKOWQ92917 476 aaPredicted RBP eCLIP14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 UPF3AQ9H1J1 476 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 PSTPIP2Q9H939 334 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 GNEQ9Y223 722 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 SYNRGQ9UMZ2 1314 aa14.61□□□□□ -0.07
CCDC90B-216ENST00000529856 MEIS2O14770 477 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 PRPF3O43395 683 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 EIF3JO75822 258 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 NR3C2P08235 984 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 NKX3-2P78367 333 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 WWC2Q6AWC2 1192 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 DPF3Q92784 378 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 CUL5Q93034 780 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 PDCD2LQ9BRP1 358 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 WDR11Q9BZH6 1224 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 SENP6Q9GZR1 1112 aaPredicted RBP14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 NCOA5Q9HCD5 579 aaKnown RBP14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 Q9Y3F1 56 aa14.6□□□□□ -0.07
CCDC90B-216ENST00000529856 PDE4DIPQ5VU43 2346 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 CTAGE5O15320 804 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 IFNAR1P17181 557 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 CST5P28325 142 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 PGM5Q15124 567 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 ANKRD1Q15327 319 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 PFKFB3Q16875 520 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 CCSAPQ6IQ19 270 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 TYW1BQ6NUM6 668 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 VSIG10LQ86VR7 867 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 SCFD2Q8WU76 684 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 TSEN34Q9BSV6 310 aaKnown RBP14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 BARHL2Q9NY43 387 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 PHF24Q9UPV7 400 aa14.59□□□□□ -0.07
CCDC90B-216ENST00000529856 MYADML2A6NDP7 307 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 STXBP3O00186 592 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 DYNC1LI2O43237 492 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 C6orf222P0C671 652 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 MYCLP12524 364 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 PTGS1P23219 599 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 NEK4P51957 841 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 AK2P54819 239 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 NAPAP54920 295 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 IRX5P78411 483 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 KCNA10Q16322 511 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 PKN1Q16512 942 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 TEX2Q8IWB9 1127 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 PHKBQ93100 1093 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 RNF26Q9BY78 433 aaPredicted RBP14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 AP5M1Q9H0R1 490 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 TPCN1Q9ULQ1 816 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 FRMPD4Q14CM0 1322 aa14.58□□□□□ -0.08
CCDC90B-216ENST00000529856 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 NKRFO15226 690 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 SCG2P13521 617 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 ACLYP53396 1101 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 AKAP17AQ02040 695 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 STK3Q13188 491 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 GNASQ5JWF2 1037 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 PPP1R18Q6NYC8 613 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 SEPT14Q6ZU15 432 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 PCSK9Q8NBP7 692 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 IL31RAQ8NI17 732 aa14.57□□□□□ -0.08
CCDC90B-216ENST00000529856 FERMT2Q96AC1 680 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms