RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF396Q96N95 335 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 PORCNQ9H237 461 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 ABHD16BQ9H3Z7 469 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 SRRDQ9UH36 339 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 CFAP45Q9UL16 551 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 RIPK3Q9Y572 518 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 DNAJC25-GNG10A0A024R161 153 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 hCG_1642624A0A1W2PR95 340 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 NFIBO00712 420 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 MEIS2O14770 477 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 NKRFO15226 690 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 MARCH6O60337 910 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 PPP1R11O60927 126 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 CYP3A4P08684 503 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 HSPA1AP0DMV8 641 aaKnown RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 HSPA1BP0DMV9 641 aaKnown RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 SYT1P21579 422 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 U2AF2P26368 475 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 SREBF1P36956 1147 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 ALDH5A1P51649 535 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 SNAP25P60880 206 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 BRDTQ58F21 947 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 MUM1L1Q5H9M0 696 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 MAMDC4Q6UXC1 1216 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 FCHSD1Q86WN1 690 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-211ENST00000528787 RAB34Q9BZG1 259 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 PXMP2Q9NR77 195 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 PCDHA6Q9UN73 950 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 PCDHA8Q9Y5H6 950 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 FRMPD4Q14CM0 1322 aa9.03□□□□□ -0.96
SSBP3-211ENST00000528787 SMCHD1A6NHR9 2005 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 DOCK3Q8IZD9 2030 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 TBX3O15119 743 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 HMGCRP04035 888 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-211ENST00000528787 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 ST3GAL1Q11201 340 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 SLC35G1Q2M3R5 365 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 ZNF792Q3KQV3 632 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 SLFN12Q8IYM2 578 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 CD99L2Q8TCZ2 262 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 MORC4Q8TE76 937 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 SCFD2Q8WU76 684 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 GPRASP2Q96D09 838 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 MAML3Q96JK9 1138 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 ANO3Q9BYT9 981 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 SPC25Q9HBM1 224 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 CHMP5Q9NZZ3 219 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 BIN2Q9UBW5 565 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-211ENST00000528787 TRIM17Q9Y577 477 aa9.02□□□□□ -0.97
SSBP3-211ENST00000528787 KIAA1217Q5T5P2 1943 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 FIBPO43427 364 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 ADCY3O60266 1144 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 NR3C2P08235 984 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 HSPA8P11142 646 aaKnown RBP9.01□□□□□ -0.97
SSBP3-211ENST00000528787 HOXA13P31271 388 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-211ENST00000528787 CIITAP33076 1130 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 FLT3LGP49771 235 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 NEDD9Q14511 834 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 TTLL4Q14679 1199 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 PGM5Q15124 567 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 JAKMIP3Q5VZ66 844 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 IQSEC1Q6DN90 963 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 PPP4R3AQ6IN85 833 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 FBXO46Q6PJ61 603 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-211ENST00000528787 USP17L6PQ6QN14 398 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 SLC30A10Q6XR72 485 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 PIK3AP1Q6ZUJ8 805 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 VSIG10LQ86VR7 867 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 USP6NLQ92738 828 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 TNPO1Q92973 898 aaKnown RBP9.01□□□□□ -0.97
SSBP3-211ENST00000528787 PDCD2LQ9BRP1 358 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 GJD2Q9UKL4 321 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 KCNJ14Q9UNX9 436 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 MYH7BA7E2Y1 1941 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 RPTORQ8N122 1335 aa9.01□□□□□ -0.97
SSBP3-211ENST00000528787 CYP3A7-CYP3A51PA0A087WV96 503 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 BTBD18B2RXH4 712 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 M0R2N6 131 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 OPLAHO14841 1288 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 ZEB2O60315 1214 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 DKC1O60832 514 aaKnown RBP eCLIP9□□□□□ -0.97
SSBP3-211ENST00000528787 PGK2P07205 417 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 CYP2B6P20813 491 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 CYP3A7P24462 503 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 EDNRBP24530 442 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 GRK4P32298 578 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 PRKCZQ05513 592 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 MTMR1Q13613 665 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 TMEM266Q2M3C6 531 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 SLC9C1Q4G0N8 1177 aa9□□□□□ -0.97
SSBP3-211ENST00000528787 CEP55Q53EZ4 464 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms