RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SLF2Q8IX21 1173 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 FERMT2Q96AC1 680 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 RNPC3Q96LT9 517 aaKnown RBP19.71■□□□□ 0.75
LTBP3-210ENST00000528516 GPR108Q9NPR9 543 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 SPDYE3A6NKU9 549 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 BACH1O14867 736 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 KCNQ2O43526 872 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 HDLBPQ00341 1268 aaKnown RBP19.71■□□□□ 0.75
LTBP3-210ENST00000528516 CARD10Q9BWT7 1032 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 PPP1R12AO14974 1030 aaPredicted RBP19.71■□□□□ 0.75
LTBP3-210ENST00000528516 REXO1Q8N1G1 1221 aaKnown RBP19.71■□□□□ 0.75
LTBP3-210ENST00000528516 SMCR8Q8TEV9 937 aaPredicted RBP19.71■□□□□ 0.75
LTBP3-210ENST00000528516 KANSL2Q9H9L4 492 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 ESYT3A0FGR9 886 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 MDM2Q00987 491 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 COA7Q96BR5 231 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 PDE2AO00408 941 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 PSMD14O00487 310 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 BUB1BO60566 1050 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 FMNL1O95466 1100 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 RPN1P04843 607 aaKnown RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 CCT8L2Q96SF2 557 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 PCDHB13Q9Y5F0 798 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 BICDL2A1A5D9 508 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 NLRP14Q86W24 1093 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 PARP9Q8IXQ6 854 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 HAUS2Q9NVX0 235 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 FBXO2Q9UK22 296 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 DUSP10Q9Y6W6 482 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 NCAPD2Q15021 1401 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 UBN2Q6ZU65 1347 aa19.7■□□□□ 0.74
LTBP3-210ENST00000528516 IFIH1Q9BYX4 1025 aaKnown RBP19.7■□□□□ 0.74
LTBP3-210ENST00000528516 CALCRLQ16602 461 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 CPLX4Q7Z7G2 160 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 PNMA8AQ86V59 439 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-210ENST00000528516 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 PAGE5Q96GU1 130 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 ZIM3Q96PE6 472 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 GRIN2DO15399 1336 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 FSBPO95073 299 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-210ENST00000528516 STAG1Q8WVM7 1258 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 EPN3Q9H201 632 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 ALS2CLQ60I27 953 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 CPXCR1Q8N123 301 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 TSEN2Q8NCE0 465 aaKnown RBP19.69■□□□□ 0.74
LTBP3-210ENST00000528516 CELF1Q92879 486 aaKnown RBP19.69■□□□□ 0.74
LTBP3-210ENST00000528516 EHD2Q9NZN4 543 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 NFU1Q9UMS0 254 aa19.69■□□□□ 0.74
LTBP3-210ENST00000528516 DCCP43146 1447 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 PPP1R37O75864 691 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 CUL4BQ13620 913 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 TTMPQ5BVD1 217 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 SPICE1Q8N0Z3 855 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 UHMK1Q8TAS1 419 aaKnown RBP19.68■□□□□ 0.74
LTBP3-210ENST00000528516 TACO1Q9BSH4 297 aaKnown RBP19.68■□□□□ 0.74
LTBP3-210ENST00000528516 NYXQ9GZU5 481 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 ANKRD2Q9GZV1 360 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 GUCY2DQ02846 1103 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 UBE4AQ14139 1066 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 ACTN4O43707 911 aaKnown RBP19.68■□□□□ 0.74
LTBP3-210ENST00000528516 SLC1A4P43007 532 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 PREPLQ4J6C6 727 aaPredicted RBP19.68■□□□□ 0.74
LTBP3-210ENST00000528516 LACRTQ9GZZ8 138 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 LY9Q9HBG7 655 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 MCM8Q9UJA3 840 aa19.68■□□□□ 0.74
LTBP3-210ENST00000528516 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 CCDC50Q8IVM0 306 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 HPS3Q969F9 1004 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 HOMER2Q9NSB8 354 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 STIM2Q9P246 746 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 GSG1L2A8MUP6 293 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 SMTNP53814 917 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 UBXN2AP68543 259 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 IFT20Q8IY31 132 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 PAIP2Q9BPZ3 127 aaKnown RBP19.67■□□□□ 0.74
LTBP3-210ENST00000528516 VCPKMTQ9H867 229 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 CEP104O60308 925 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 CFBP00751 764 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 ABCB4P21439 1286 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 PPP1R7Q15435 360 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 SEPT7Q16181 437 aaKnown RBP19.67■□□□□ 0.74
LTBP3-210ENST00000528516 TCP11X2Q5H9J9 407 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 MICAL1Q8TDZ2 1067 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 MRRFQ96E11 262 aaKnown RBP19.67■□□□□ 0.74
LTBP3-210ENST00000528516 EPB41L5Q9HCM4 733 aa19.67■□□□□ 0.74
LTBP3-210ENST00000528516 SORBS3O60504 671 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 SARSP49591 514 aaKnown RBP19.66■□□□□ 0.74
LTBP3-210ENST00000528516 SNAP25P60880 206 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 EMBQ6PCB8 327 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 SPATA4Q8NEY3 305 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 GSDMAQ96QA5 445 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.66■□□□□ 0.74
LTBP3-210ENST00000528516 KIAA0753Q2KHM9 967 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 NFRKBQ6P4R8 1299 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 DPP8Q6V1X1 898 aaPredicted RBP19.66■□□□□ 0.74
LTBP3-210ENST00000528516 SRPRBQ9Y5M8 271 aaKnown RBP19.66■□□□□ 0.74
LTBP3-210ENST00000528516 RFX7Q2KHR2 1363 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 FAM196BA6NMK8 535 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms