RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 FAM217BQ9NTX9 383 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 SLC15A5A6NIM6 579 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 KBTBD13C9JR72 458 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 NFIBO00712 420 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 PLA2G6O60733 806 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 PPFIA3O75145 1194 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 IGHA2P01877 340 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 PBX2P40425 430 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 CNTN2Q02246 1040 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 ADGRF4Q8IZF3 695 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 NECAB1Q8N987 351 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 ZNF274Q96GC6 653 aaPredicted RBP13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 MMP19Q99542 508 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 TEX13BQ9BXU2 312 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 RANBP17Q9H2T7 1088 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 MCM3APO60318 1980 aa13.38□□□□□ -0.27
CCDC90B-210ENST00000528149 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CYTH3O43739 400 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 PFKFB2O60825 505 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 ZBED4O75132 1171 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 ALAS1P13196 640 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 BMP1P13497 986 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CYBAP13498 195 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 ADD1P35611 737 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CCNA1P78396 465 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 TLE2Q04725 743 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 FPGSQ05932 587 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 ST3GAL1Q11201 340 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 SCRN1Q12765 414 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 TMEM31Q5JXX7 168 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 FERMT2Q96AC1 680 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 JMJD4Q9H9V9 463 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CTDP1Q9Y5B0 961 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-210ENST00000528149 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 hCG_1642624A0A1W2PR95 340 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 ADCY6O43306 1168 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 CLTBP09497 229 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 IGFBP4P22692 258 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 ADCYAP1R1P41586 468 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 GNAQP50148 359 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 TFF2Q03403 129 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 ZNF792Q3KQV3 632 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 USH1GQ495M9 461 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 C1orf53Q5VUE5 145 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 ARRDC4Q8NCT1 418 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 CLEC4DQ8WXI8 215 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 A1CFQ9NQ94 594 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 CCPG1Q9ULG6 757 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 IVNS1ABPQ9Y6Y0 642 aa13.36□□□□□ -0.27
CCDC90B-210ENST00000528149 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 GRXCR1A8MXD5 290 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 FCER1AP12319 257 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 KCNQ1P51787 676 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 FUT2Q10981 343 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 PHKBQ93100 1093 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 PIGSQ96S52 555 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 MROH8Q9H579 483 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 RIOX1Q9H6W3 641 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 C11orf16Q9NQ32 467 aa13.35□□□□□ -0.27
CCDC90B-210ENST00000528149 FAM86C2PA6NEL3 165 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 CPLX1O14810 134 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 OPLAHO14841 1288 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 HOXC6P09630 235 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 RAG1P15918 1043 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 NTRK3Q16288 839 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 DPP9Q86TI2 863 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 MTMR8Q96EF0 704 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 RRP36Q96EU6 259 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 TMX3Q96JJ7 454 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms