RNA–Protein interactions for RNA: ENST00000527952.1

PTPRJ-205, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 5

Gene PTPRJ, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-205ENST00000527952 TTLL4Q14679 1199 aa28.15■■■□□ 2.1
PTPRJ-205ENST00000527952 CDC37Q16543 378 aaPredicted RBP28.15■■■□□ 2.1
PTPRJ-205ENST00000527952 GPATCH4Q5T3I0 446 aaKnown RBP28.15■■■□□ 2.1
PTPRJ-205ENST00000527952 RPUSD2Q8IZ73 545 aaKnown RBP28.15■■■□□ 2.1
PTPRJ-205ENST00000527952 PNMA1Q8ND90 353 aa28.15■■■□□ 2.1
PTPRJ-205ENST00000527952 SLC4A7Q9Y6M7 1214 aa28.15■■■□□ 2.1
PTPRJ-205ENST00000527952 MYH6P13533 1939 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 DGKHQ86XP1 1220 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 DNERQ8NFT8 737 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 SCFD2Q8WU76 684 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 TAAR1Q96RJ0 339 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 MPHOSPH6Q99547 160 aaKnown RBP28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 KAT14Q9H8E8 782 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 SLC28A3Q9HAS3 691 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 VAT1LQ9HCJ6 419 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 DIAPH3Q9NSV4 1193 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 PNMA2Q9UL42 364 aa28.14■■■□□ 2.1
PTPRJ-205ENST00000527952 SUPT20HL2P0C7V6 817 aa28.13■■■□□ 2.09
PTPRJ-205ENST00000527952 ADGRF4Q8IZF3 695 aa28.13■■■□□ 2.09
PTPRJ-205ENST00000527952 EXOC6Q8TAG9 804 aa28.13■■■□□ 2.09
PTPRJ-205ENST00000527952 NUCB1Q02818 461 aa28.12■■■□□ 2.09
PTPRJ-205ENST00000527952 BRDTQ58F21 947 aaPredicted RBP28.12■■■□□ 2.09
PTPRJ-205ENST00000527952 SEPT14Q6ZU15 432 aa28.12■■■□□ 2.09
PTPRJ-205ENST00000527952 IQCA1Q86XH1 822 aa28.12■■■□□ 2.09
PTPRJ-205ENST00000527952 OSBPL3Q9H4L5 887 aa28.12■■■□□ 2.09
PTPRJ-205ENST00000527952 COL20A1Q9P218 1284 aa28.12■■■□□ 2.09
PTPRJ-205ENST00000527952 A6NJR5 290 aa28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 RBAK-RBAKDNI3L0D1 243 aa28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 NKRFO15226 690 aaKnown RBP eCLIP28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 DHX16O60231 1041 aaKnown RBP28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 ZSCAN10Q96SZ4 725 aaPredicted RBP28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 ZSWIM5Q9P217 1185 aa28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 TRIP12Q14669 1992 aaPredicted RBP28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 RAD50Q92878 1312 aa28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 TTC28Q96AY4 2481 aa28.11■■■□□ 2.09
PTPRJ-205ENST00000527952 LY6KQ17RY6 165 aa28.1■■■□□ 2.09
PTPRJ-205ENST00000527952 QRICH1Q2TAL8 776 aa28.1■■■□□ 2.09
PTPRJ-205ENST00000527952 TJAP1Q5JTD0 557 aa28.1■■■□□ 2.09
PTPRJ-205ENST00000527952 CHST3Q7LGC8 479 aa28.1■■■□□ 2.09
PTPRJ-205ENST00000527952 ENAHQ8N8S7 591 aaPredicted RBP28.1■■■□□ 2.09
PTPRJ-205ENST00000527952 SYTL5Q8TDW5 730 aaPredicted RBP28.1■■■□□ 2.09
PTPRJ-205ENST00000527952 ATP2A2P16615 1042 aaKnown RBP28.09■■■□□ 2.09
PTPRJ-205ENST00000527952 AFG1LQ8WV93 481 aa28.09■■■□□ 2.09
PTPRJ-205ENST00000527952 SYMPKQ92797 1274 aaKnown RBP28.09■■■□□ 2.09
PTPRJ-205ENST00000527952 ABCB11O95342 1321 aa28.09■■■□□ 2.09
PTPRJ-205ENST00000527952 B4DLN1 442 aa28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 MRPL12P52815 198 aaKnown RBP28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 PPP2R2DQ66LE6 453 aa28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 RGS22Q8NE09 1264 aa28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 TET1Q8NFU7 2136 aa28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 IL25Q9H293 177 aa28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 KIAA1217Q5T5P2 1943 aa28.08■■■□□ 2.09
PTPRJ-205ENST00000527952 CCDC178Q5BJE1 867 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 NFRKBQ6P4R8 1299 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 CCDC62Q6P9F0 684 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 MICALL1Q8N3F8 863 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 ANKS1AQ92625 1134 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 JMJD4Q9H9V9 463 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 NOD1Q9Y239 953 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 PCDHA11Q9Y5I1 949 aa28.07■■■□□ 2.08
PTPRJ-205ENST00000527952 CHD7Q9P2D1 2997 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 KPNA6O60684 536 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 PARP1P09874 1014 aaKnown RBP28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 IQCF3P0C7M6 154 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 EIF2AK2P19525 551 aaKnown RBP28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 IMMTQ16891 758 aaKnown RBP28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 ASPRV1Q53RT3 343 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 FBXO11Q86XK2 927 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 STAG2Q8N3U4 1231 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 RETREG2Q8NC44 543 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 RMDN3Q96TC7 470 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 DSCC1Q9BVC3 393 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 FTOQ9C0B1 505 aaKnown RBP eCLIP28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 CERS4Q9HA82 394 aa28.06■■■□□ 2.08
PTPRJ-205ENST00000527952 MYH7BA7E2Y1 1941 aa28.05■■■□□ 2.08
PTPRJ-205ENST00000527952 RFXAPO00287 272 aa28.05■■■□□ 2.08
PTPRJ-205ENST00000527952 MMP3P08254 477 aa28.05■■■□□ 2.08
PTPRJ-205ENST00000527952 AAMPQ13685 434 aa28.05■■■□□ 2.08
PTPRJ-205ENST00000527952 NSUN6Q8TEA1 469 aaKnown RBP28.05■■■□□ 2.08
PTPRJ-205ENST00000527952 TANC1Q9C0D5 1861 aa28.05■■■□□ 2.08
PTPRJ-205ENST00000527952 GH1P01241 217 aa28.04■■■□□ 2.08
PTPRJ-205ENST00000527952 PFKMP08237 780 aa28.04■■■□□ 2.08
PTPRJ-205ENST00000527952 ARHGAP1Q07960 439 aa28.04■■■□□ 2.08
PTPRJ-205ENST00000527952 THEGQ9P2T0 379 aa28.04■■■□□ 2.08
PTPRJ-205ENST00000527952 HIP1O00291 1037 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 CFBP00751 764 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 CA3P07451 260 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 STXBP2Q15833 593 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 PTGISQ16647 500 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 ARHGEF16Q5VV41 709 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 MCF2L2Q86YR7 1114 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 KAT2BQ92831 832 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 UBAC1Q9BSL1 405 aa28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 MRPL11Q9Y3B7 192 aaKnown RBP28.03■■■□□ 2.08
PTPRJ-205ENST00000527952 SORBS3O60504 671 aa28.02■■■□□ 2.08
PTPRJ-205ENST00000527952 ACTN1P12814 892 aa28.02■■■□□ 2.08
PTPRJ-205ENST00000527952 PTPN11Q06124 597 aaPredicted RBP28.02■■■□□ 2.08
PTPRJ-205ENST00000527952 TMEM67Q5HYA8 995 aa28.02■■■□□ 2.08
PTPRJ-205ENST00000527952 GDF6Q6KF10 455 aaPredicted RBP28.02■■■□□ 2.08
PTPRJ-205ENST00000527952 KRT23Q9C075 422 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms