RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 ACRP10323 421 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 FOSL2P15408 326 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 PTGS1P23219 599 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 IFIT1BQ5T764 474 aaKnown RBP12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 NFRKBQ6P4R8 1299 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 FBXO11Q86XK2 927 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 TIFAQ96CG3 184 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 LCTP09848 1927 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 LAMA4Q16363 1823 aa12.95□□□□□ -0.34
AMBRA1-204ENST00000526545 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 PFKMP08237 780 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 MYL3P08590 195 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 TRDNQ13061 729 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 TRAF1Q13077 416 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 RAB30Q15771 203 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 STXBP2Q15833 593 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-204ENST00000526545 CHMLP26374 656 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 CCL23P55773 120 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 SYTL5Q8TDW5 730 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 TAAR1Q96RJ0 339 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 RMDN3Q96TC7 470 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 AMNQ9BXJ7 453 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 PBX4Q9BYU1 374 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 WNT8AQ9H1J5 351 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-204ENST00000526545 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 KLRF2D3W0D1 207 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 GH1P01241 217 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 RFC2P35250 354 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 GHRHRQ02643 423 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 SEC23AQ15436 765 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 OTOP2Q7RTS6 562 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 TRMT13Q9NUP7 481 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-204ENST00000526545 ERICH2A1L162 156 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 PALM3A6NDB9 673 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 ZBTB5O15062 677 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 ARIH2O95376 493 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 HSD17B4P51659 736 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 ARHGEF16Q5VV41 709 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 COPS5Q92905 334 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 MTMR8Q96EF0 704 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 IL25Q9H293 177 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 SLC28A3Q9HAS3 691 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 CXXC1Q9P0U4 656 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 MAD2L2Q9UI95 211 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 SLC4A7Q9Y6M7 1214 aa12.91□□□□□ -0.34
AMBRA1-204ENST00000526545 CFBP00751 764 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 CYP21A2P08686 494 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 CYP2C9P11712 490 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 PBX2P40425 430 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 BFSP2Q13515 415 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 SART3Q15020 963 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 LY6KQ17RY6 165 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 SEPT14Q6ZU15 432 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 STOX1Q6ZVD7 989 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 SCLYQ96I15 445 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 PXMP2Q9NR77 195 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
AMBRA1-204ENST00000526545 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.35
AMBRA1-204ENST00000526545 IFIT3O14879 490 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 NR3C2P08235 984 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 MMP3P08254 477 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 ACTN1P12814 892 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 ARHGAP1Q07960 439 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 LAMC2Q13753 1193 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 DGKDQ16760 1214 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms