RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HERC4Q5GLZ8 1057 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-204ENST00000526430 SNRNP48Q6IEG0 339 aaKnown RBP12.87□□□□□ -0.35
NEDD8-204ENST00000526430 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
NEDD8-204ENST00000526430 ADHFE1Q8IWW8 467 aa12.87□□□□□ -0.35
NEDD8-204ENST00000526430 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
NEDD8-204ENST00000526430 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEDD8-204ENST00000526430 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
NEDD8-204ENST00000526430 ARPP21Q9UBL0 812 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-204ENST00000526430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEDD8-204ENST00000526430 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 KCNA4P22459 653 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
NEDD8-204ENST00000526430 ERVK-21P61565 698 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 ERMP1Q7Z2K6 904 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
NEDD8-204ENST00000526430 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 NAPBQ9H115 298 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 Q9Y3F1 56 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
NEDD8-204ENST00000526430 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-204ENST00000526430 CYP21A2P08686 494 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 CYP2C9P11712 490 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 RASA1P20936 1047 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 KCNJ6P48051 423 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 TDO2P48775 406 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 PSMC6P62333 389 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 TCF15Q12870 199 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 TBC1D10CQ8IV04 446 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 STK11IPQ8N1F8 1099 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 KCNB2Q92953 911 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 CCDC17Q96LX7 622 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 NACAP1Q9BZK3 213 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 TRMT13Q9NUP7 481 aaKnown RBP12.85□□□□□ -0.35
NEDD8-204ENST00000526430 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 COL4A6Q14031 1691 aa12.85□□□□□ -0.35
NEDD8-204ENST00000526430 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 AKR1B1P15121 316 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 IRS1P35568 1242 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 HAND2P61296 217 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
NEDD8-204ENST00000526430 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 ANKRD35Q8N283 1001 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 SLF1Q9BQI6 1058 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
NEDD8-204ENST00000526430 RBM8AQ9Y5S9 174 aaKnown RBP12.84□□□□□ -0.35
NEDD8-204ENST00000526430 LAMA4Q16363 1823 aa12.83□□□□□ -0.35
NEDD8-204ENST00000526430 LINC01553A4QN01 128 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 PRDM1O75626 825 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
NEDD8-204ENST00000526430 WDR5P61964 334 aaKnown RBP12.83□□□□□ -0.36
NEDD8-204ENST00000526430 IER5LQ5T953 404 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 FAM133AQ8N9E0 248 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 CHST13Q8NET6 341 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 EDAQ92838 391 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 PABPC5Q96DU9 382 aaKnown RBP12.83□□□□□ -0.36
NEDD8-204ENST00000526430 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
NEDD8-204ENST00000526430 FTOQ9C0B1 505 aaKnown RBP eCLIP12.83□□□□□ -0.367e-7■■□□□ 13.4
NEDD8-204ENST00000526430 IRF2BPLQ9H1B7 796 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 KANSL2Q9H9L4 492 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 CTNNA3Q9UI47 895 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 GVINP1Q7Z2Y8 2422 aa12.83□□□□□ -0.36
NEDD8-204ENST00000526430 KMT2BQ9UMN6 2715 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-204ENST00000526430 VPS13AQ96RL7 3174 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 ASB14A6NK59 587 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 H3BQ06 376 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-204ENST00000526430 SLC27A2O14975 620 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 ORC4O43929 436 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 GJB5O95377 273 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 SMPD1P17405 629 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
NEDD8-204ENST00000526430 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
NEDD8-204ENST00000526430 RAD9AQ99638 391 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 ALG13Q9NP73 1137 aaKnown RBP12.82□□□□□ -0.36
NEDD8-204ENST00000526430 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
NEDD8-204ENST00000526430 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-204ENST00000526430 EPG5Q9HCE0 2579 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 ZNF213O14771 459 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 DYNC1LI2O43237 492 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-204ENST00000526430 HSPA4P34932 840 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 NOVP48745 357 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 OAZ1P54368 228 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 BFSP2Q13515 415 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 IQSEC1Q6DN90 963 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 MUTYHQ9UIF7 546 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms