RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PAK6Q9NQU5 681 aaPredicted RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 SH3GLB2Q9NR46 395 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 CNPY2Q9Y2B0 182 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 DDX49Q9Y6V7 483 aaKnown RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 KIAA0100Q14667 2235 aaKnown RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 ESYT2A0FGR8 921 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 B4DLN1 442 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 DTNBO60941 627 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 ZNF865P0CJ78 1059 aaPredicted RBP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 FDPSP14324 419 aaKnown RBP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 ADCY7P51828 1080 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 ARHGEF16Q5VV41 709 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 FCHSD1Q86WN1 690 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 CCDC12Q8WUD4 166 aaPredicted RBP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 SHISA4Q96DD7 197 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 TMX3Q96JJ7 454 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 IWS1Q96ST2 819 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 MPHOSPH6Q99547 160 aaKnown RBP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 LLPHQ9BRT6 129 aaKnown RBP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 GLT8D2Q9H1C3 349 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 ABHD16BQ9H3Z7 469 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 PXMP2Q9NR77 195 aa14.86□□□□□ -0.03
SMPD1-202ENST00000526280 ORC3Q9UBD5 711 aaPredicted RBP14.86□□□□□ -0.03
SMPD1-202ENST00000526280 JAK2O60674 1132 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 ACVR2BQ13705 512 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 UBE2SQ16763 222 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 FAM177A1Q8N128 213 aaPredicted RBP14.85□□□□□ -0.03
SMPD1-202ENST00000526280 CCDC148Q8NFR7 591 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 AIFM3Q96NN9 605 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 VPS54Q9P1Q0 977 aa14.85□□□□□ -0.03
SMPD1-202ENST00000526280 SEPT4O43236 478 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 GJB1P08034 283 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 NR3C2P08235 984 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 EIF2AK2P19525 551 aaKnown RBP14.84□□□□□ -0.03
SMPD1-202ENST00000526280 CNGA1P29973 690 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 GNA11P29992 359 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 RGS19P49795 217 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 PDE4DQ08499 809 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 WASF1Q92558 559 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 PDCD2LQ9BRP1 358 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 C6orf50Q9HD87 102 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 VTA1Q9NP79 307 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 ZHX1Q9UKY1 873 aaPredicted RBP14.84□□□□□ -0.03
SMPD1-202ENST00000526280 BRCA2P51587 3418 aa14.84□□□□□ -0.03
SMPD1-202ENST00000526280 FRMPD4Q14CM0 1322 aa14.83□□□□□ -0.03
SMPD1-202ENST00000526280 ANP32AP39687 249 aaKnown RBP14.83□□□□□ -0.04
SMPD1-202ENST00000526280 CLK2P49760 499 aaKnown RBP14.83□□□□□ -0.04
SMPD1-202ENST00000526280 PGM5Q15124 567 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 STXBP2Q15833 593 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 LHX8Q68G74 356 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 TAPT1Q6NXT6 567 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 EEPD1Q7L9B9 569 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 VSIG10LQ86VR7 867 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 DEFB118Q96PH6 123 aa14.83□□□□□ -0.04
SMPD1-202ENST00000526280 DDX20Q9UHI6 824 aaKnown RBP14.83□□□□□ -0.04
SMPD1-202ENST00000526280 SPDYE3A6NKU9 549 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 ADAMTS3O15072 1205 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 MSCO60682 206 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 EIF3JO75822 258 aaKnown RBP14.82□□□□□ -0.04
SMPD1-202ENST00000526280 SGPL1O95470 568 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 FOSP01100 380 aaPredicted RBP14.82□□□□□ -0.04
SMPD1-202ENST00000526280 XBP1P17861 261 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 GJA8P48165 433 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 NLRP5P59047 1200 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 CCDC144BQ3MJ40 725 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
SMPD1-202ENST00000526280 IL31RAQ8NI17 732 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 BICD2Q8TD16 824 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 U2AF1L4Q8WU68 220 aaKnown RBP14.82□□□□□ -0.04
SMPD1-202ENST00000526280 ALG1Q9BT22 464 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 CRISPLD2Q9H0B8 497 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 FAM184BQ9ULE4 1060 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 PCDHA6Q9UN73 950 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 PCDHA8Q9Y5H6 950 aa14.82□□□□□ -0.04
SMPD1-202ENST00000526280 RBM47A0AV96 593 aaKnown RBP14.81□□□□□ -0.04
SMPD1-202ENST00000526280 POTEFA5A3E0 1075 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 MYCLP12524 364 aaPredicted RBP14.81□□□□□ -0.04
SMPD1-202ENST00000526280 AKR1A1P14550 325 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 CCND2P30279 289 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 HMGN5P82970 282 aaKnown RBP14.81□□□□□ -0.04
SMPD1-202ENST00000526280 AP3B2Q13367 1082 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 NPY5RQ15761 445 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 MCTP2Q6DN12 878 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 IQSEC1Q6DN90 963 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 GALNT17Q6IS24 598 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 XRRA1Q6P2D8 792 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 SNX21Q969T3 373 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 PHF20Q9BVI0 1012 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 PDGFCQ9NRA1 345 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 GJB4Q9NTQ9 266 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 TMEM260Q9NX78 707 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 PCDHA4Q9UN74 947 aa14.81□□□□□ -0.04
SMPD1-202ENST00000526280 LRRC37A2A6NM11 1700 aa14.8□□□□□ -0.04
SMPD1-202ENST00000526280 CAPN2P17655 700 aa14.8□□□□□ -0.04
SMPD1-202ENST00000526280 MRPS9P82933 396 aaKnown RBP14.8□□□□□ -0.04
SMPD1-202ENST00000526280 MLLT1Q03111 559 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms