RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 SFMBT1Q9UHJ3 866 aa3.92□□□□□ -1.78
TRAPPC4-207ENST00000526141 PPT2Q9UMR5 302 aa3.92□□□□□ -1.78
TRAPPC4-207ENST00000526141 PCDHB5Q9Y5E4 795 aa3.92□□□□□ -1.78
TRAPPC4-207ENST00000526141 KDM2BQ8NHM5 1336 aa3.92□□□□□ -1.78
TRAPPC4-207ENST00000526141 ROBO2Q9HCK4 1378 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 SSU72P8A0A1W2PR75 194 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 NOTOA8MTQ0 251 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 DIAPH1O60610 1272 aaKnown RBP3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 SCGB1D2O95969 90 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 PF4P02776 101 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 MYCLP1P12525 358 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 ATF3P18847 181 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 PLCG1P19174 1290 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 ARL4AP40617 200 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 CRKP46108 304 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 LIG3P49916 1009 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 POU5F1BQ06416 359 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 MCL1Q07820 350 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 CAMK2GQ13555 558 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 MAP3K11Q16584 847 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 PPP4R4Q6NUP7 873 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 CEP128Q6ZU80 1094 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 SLFN12Q8IYM2 578 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 TMEFF1Q8IYR6 380 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 SYT8Q8NBV8 401 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 MAP6Q96JE9 813 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 PWWP2AQ96N64 755 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 FERD3LQ96RJ6 166 aa3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 FAM126AQ9BYI3 521 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC4-207ENST00000526141 A0A087X0B3 334 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 SHTN1A0MZ66 631 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 RBAK-RBAKDNI3L0D1 243 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 LRRN2O75325 713 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 USP2O75604 605 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 RFPL3O75679 317 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 RASGRP1O95267 797 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 IMPDH2P12268 514 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 KCNC1P48547 511 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 CDR1P51861 262 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 PCBP3P57721 371 aaKnown RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 ERVFRD-1P60508 538 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 CAP1Q01518 475 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 SSRP1Q08945 709 aaKnown RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 FOXD4Q12950 439 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 LRRC41Q15345 812 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 LONRF2Q1L5Z9 754 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 SEZ6Q53EL9 994 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 ZC3H12BQ5HYM0 836 aaKnown RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 SYCP2LQ5T4T6 812 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 LARP1BQ659C4 914 aaKnown RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 WWC2Q6AWC2 1192 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 WAPLQ7Z5K2 1190 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 LDHDQ86WU2 507 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 CHPFQ8IZ52 775 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 MYO1HQ8N1T3 1032 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 SYTL5Q8TDW5 730 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 FBXO41Q8TF61 875 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 PPM1EQ8WY54 764 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 KREMEN1Q96MU8 473 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 ARPC5LQ9BPX5 153 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 PLCD4Q9BRC7 762 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 PFDN2Q9UHV9 154 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 MAPRE3Q9UPY8 281 aa3.9□□□□□ -1.79
TRAPPC4-207ENST00000526141 SHISA3A0PJX4 238 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 UPK3BL1B0FP48 263 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 UPK3BL2E5RIL1 263 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 K7ESM1 405 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 PDE8AO60658 829 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 GJB6O95452 261 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 BPNT1O95861 308 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 FOSP01100 380 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 ZNF165P49910 485 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 CASP7P55210 303 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 RTP1P59025 263 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 LAPTM5Q13571 262 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 RTP5Q14D33 572 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 ZNF827Q17R98 1081 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 TMEM201Q5SNT2 666 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 UBXN11Q5T124 520 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 FBXW10Q5XX13 1052 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 GALNT18Q6P9A2 607 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 HHIPL2Q6UWX4 724 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 SPATC1Q76KD6 591 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 RNF180Q86T96 592 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 CCDC84Q86UT8 332 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 AFAP1L2Q8N4X5 818 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 ZNF655Q8N720 491 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 C19orf47Q8N9M1 422 aaKnown RBP3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 RBBP8NLQ8NC74 664 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 SVIPQ8NHG7 77 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 ATL2Q8NHH9 583 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 TTC8Q8TAM2 541 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 ZNF512BQ96KM6 892 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 CCDC74BQ96LY2 380 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 TLR6Q9Y2C9 796 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 WASHC2CQ9Y4E1 1318 aa3.89□□□□□ -1.79
TRAPPC4-207ENST00000526141 CCDC163A0A0D9SF12 145 aa3.88□□□□□ -1.79
TRAPPC4-207ENST00000526141 E2F8A0AVK6 867 aa3.88□□□□□ -1.79
TRAPPC4-207ENST00000526141 WTIPA6NIX2 430 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms