RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 IFNAR1P17181 557 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 ADCYAP1R1P41586 468 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 PDE4DQ08499 809 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 WWC2Q6AWC2 1192 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 TYW1BQ6NUM6 668 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 EEPD1Q7L9B9 569 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 KLHDC9Q8NEP7 349 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 KIF2CQ99661 725 aa22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 LARP6Q9BRS8 491 aaKnown RBP22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 UPF3AQ9H1J1 476 aaKnown RBP22.8■■□□□ 1.24
EXOSC4-202ENST00000525936 PRPF3O43395 683 aaKnown RBP22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 SMPD1P17405 629 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 GJA9P57773 515 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 CCT2P78371 535 aaKnown RBP22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 TNFAIP2Q03169 654 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 GJC2Q5T442 439 aaPredicted RBP22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 ARHGEF16Q5VV41 709 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 CCSAPQ6IQ19 270 aaPredicted RBP22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 TEX2Q8IWB9 1127 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 PDCD2LQ9BRP1 358 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 C11orf49Q9H6J7 331 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 PSTPIP2Q9H939 334 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 NCOA5Q9HCD5 579 aaKnown RBP22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 FRMPD4Q14CM0 1322 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 SYNRGQ9UMZ2 1314 aa22.79■■□□□ 1.24
EXOSC4-202ENST00000525936 hCG_1984214I3L0E3 225 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 CTAGE5O15320 804 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 PGK1P00558 417 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 NR3C2P08235 984 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 RBM25P49756 843 aaKnown RBP22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 AK2P54819 239 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 ANKRD1Q15327 319 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 PKN1Q16512 942 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 PFKFB3Q16875 520 aaPredicted RBP22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 TMEM63BQ5T3F8 832 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 USP17L6PQ6QN14 398 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 HEATR3Q7Z4Q2 680 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 VSIG10LQ86VR7 867 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 ZNF713Q8N859 430 aaPredicted RBP22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 GPKOWQ92917 476 aaPredicted RBP eCLIP22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 BARHL2Q9NY43 387 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 TPCN1Q9ULQ1 816 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 Q9Y3F1 56 aa22.78■■□□□ 1.24
EXOSC4-202ENST00000525936 STXBP3O00186 592 aa22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 EIF3JO75822 258 aaKnown RBP22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 EIF2AK2P19525 551 aaKnown RBP22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 CST5P28325 142 aaPredicted RBP22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 STXBP2Q15833 593 aa22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 DUSP28Q4G0W2 176 aa22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 PPP1R18Q6NYC8 613 aa22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 RNF180Q86T96 592 aa22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 RNF26Q9BY78 433 aaPredicted RBP22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 RBM27Q9P2N5 1060 aaKnown RBP22.77■■□□□ 1.24
EXOSC4-202ENST00000525936 NEK4P51957 841 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 PGM5Q15124 567 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 FCHSD1Q86WN1 690 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 PHKBQ93100 1093 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 TSEN34Q9BSV6 310 aaKnown RBP22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 HTATIP2Q9BUP3 242 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 C22orf23Q9BZE7 217 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 WDR11Q9BZH6 1224 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 PHF24Q9UPV7 400 aa22.76■■□□□ 1.23
EXOSC4-202ENST00000525936 PFKFB2O60825 505 aa22.75■■□□□ 1.23
EXOSC4-202ENST00000525936 SCG2P13521 617 aa22.75■■□□□ 1.23
EXOSC4-202ENST00000525936 IRX5P78411 483 aaPredicted RBP22.75■■□□□ 1.23
EXOSC4-202ENST00000525936 CCDC62Q6P9F0 684 aa22.75■■□□□ 1.23
EXOSC4-202ENST00000525936 IL31RAQ8NI17 732 aa22.75■■□□□ 1.23
EXOSC4-202ENST00000525936 SCFD2Q8WU76 684 aa22.75■■□□□ 1.23
EXOSC4-202ENST00000525936 MYADML2A6NDP7 307 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 KBTBD13C9JR72 458 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 RGS20O76081 388 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 PTGS1P23219 599 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 SCRN1Q12765 414 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 SMARCC2Q8TAQ2 1214 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 CUL5Q93034 780 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 RIC8AQ9NPQ8 531 aa22.74■■□□□ 1.23
EXOSC4-202ENST00000525936 NAPAP54920 295 aa22.73■■□□□ 1.23
EXOSC4-202ENST00000525936 STK3Q13188 491 aa22.73■■□□□ 1.23
EXOSC4-202ENST00000525936 SENP6Q9GZR1 1112 aaPredicted RBP22.73■■□□□ 1.23
EXOSC4-202ENST00000525936 SPC25Q9HBM1 224 aa22.73■■□□□ 1.23
EXOSC4-202ENST00000525936 ESYT2A0FGR8 921 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 NKRFO15226 690 aaKnown RBP eCLIP22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 DYNC1LI2O43237 492 aaPredicted RBP22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 ARIH2O95376 493 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 C6orf222P0C671 652 aaPredicted RBP22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 MRPS9P82933 396 aaKnown RBP22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 KCNA10Q16322 511 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 TLK2Q86UE8 772 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 SLC26A6Q9BXS9 759 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 ZMYND12Q9H0C1 365 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 KIAA1217Q5T5P2 1943 aa22.72■■□□□ 1.23
EXOSC4-202ENST00000525936 SMCO2A6NFE2 343 aa22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 MOXD2PA6NHM9 499 aa22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 TXNP10599 105 aaKnown RBP22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 MYCLP12524 364 aaPredicted RBP22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 CCND2P30279 289 aa22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 CLK2P49760 499 aaKnown RBP22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 ACLYP53396 1101 aa22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 TTLL4Q14679 1199 aa22.71■■□□□ 1.23
EXOSC4-202ENST00000525936 SNX17Q15036 470 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms