RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 DIO2Q92813 273 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 CDK5RAP3Q96JB5 506 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 NAP1L5Q96NT1 182 aaPredicted RBP6.59□□□□□ -1.35
USP47-204ENST00000525078 TAAR9Q96RI9 348 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
USP47-204ENST00000525078 CGGBP1Q9UFW8 167 aaPredicted RBP6.59□□□□□ -1.35
USP47-204ENST00000525078 LRCH1Q9Y2L9 728 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 PCDHGB3Q9Y5G1 929 aa6.59□□□□□ -1.35
USP47-204ENST00000525078 TRAF5O00463 557 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA12O60330 932 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 CPP00450 1065 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 SRGAP2CP0DJJ0 459 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 ATP2A2P16615 1042 aaKnown RBP6.58□□□□□ -1.36
USP47-204ENST00000525078 TNFAIP3P21580 790 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 AKAP5P24588 427 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 C19orf57Q0VDD7 668 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 LRRC32Q14392 662 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 ANKRD39Q53RE8 183 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 FAM117BQ6P1L5 589 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 LVRNQ6Q4G3 990 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 B3GNT9Q6UX72 402 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 HID1Q8IV36 788 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 FAM43AQ8N2R8 423 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 ARHGEF39Q8N4T4 335 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 ENOX1Q8TC92 643 aaKnown RBP6.58□□□□□ -1.36
USP47-204ENST00000525078 PGBD4Q96DM1 585 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
USP47-204ENST00000525078 EIF2AK1Q9BQI3 630 aaKnown RBP6.58□□□□□ -1.36
USP47-204ENST00000525078 CRB3Q9BUF7 120 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 NKX2-4Q9H2Z4 354 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 GP6Q9HCN6 339 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 FNIP2Q9P278 1114 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 B4GALT6Q9UBX8 382 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 POLG2Q9UHN1 485 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 COQ6Q9Y2Z9 468 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA9Q9Y5G4 932 aaKnown RBP6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA8Q9Y5G5 932 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA7Q9Y5G6 932 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA6Q9Y5G7 932 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA3Q9Y5H0 932 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 PCDHGA2Q9Y5H1 932 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 SLC4A7Q9Y6M7 1214 aa6.58□□□□□ -1.36
USP47-204ENST00000525078 KAT6BQ8WYB5 2073 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 GOLGA8AA7E2F4 631 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 GOLGA8BA8MQT2 603 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 H7C1W4 665 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 ANP32CO43423 234 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 ZBED1O96006 694 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 BMP1P13497 986 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 SLC5A1P13866 664 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 CHKAP35790 457 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 TBX2Q13207 712 aaPredicted RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 IFIT5Q13325 482 aaKnown RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 PDE1CQ14123 709 aaPredicted RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 TOMM20Q15388 145 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 CCDC93Q567U6 631 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 ZC3H12AQ5D1E8 599 aaKnown RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 BROXQ5VW32 411 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 PPP4R3AQ6IN85 833 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 MZT2AQ6P582 158 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 LDHAL6AQ6ZMR3 332 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 RSRC2Q7L4I2 434 aaKnown RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 TRIM22Q8IYM9 498 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 CHST14Q8NCH0 376 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 ZBTB34Q8NCN2 500 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 FAM156AQ8NDB6 213 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 NGDNQ8NEJ9 315 aaKnown RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 IRF7Q92985 503 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 SGCZQ96LD1 299 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 TEKT5Q96M29 485 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 TBATAQ96M53 351 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 FAM193BQ96PV7 902 aaPredicted RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 TBCBQ99426 244 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 NOL6Q9H6R4 1146 aaKnown RBP6.57□□□□□ -1.36
USP47-204ENST00000525078 ARFGAP3Q9NP61 516 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 SAGE1Q9NXZ1 904 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 FBXL21Q9UKT6 434 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 PCDHGB6Q9Y5F9 930 aa6.57□□□□□ -1.36
USP47-204ENST00000525078 SOS2Q07890 1332 aaPredicted RBP6.56□□□□□ -1.36
USP47-204ENST00000525078 ERBB4Q15303 1308 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 PTPDC1A2A3K4 754 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 TRIM75PA6NK02 468 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 A6NNZ2 444 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 PRSS47A8MTI9 375 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 H3BM21 787 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 FIBPO43427 364 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 RHOBTB3O94955 611 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 THBS1P07996 1170 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 BTKQ06187 659 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
USP47-204ENST00000525078 MYBPC2Q14324 1141 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 KIAA0753Q2KHM9 967 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 KIF4BQ2VIQ3 1234 aa6.56□□□□□ -1.36
USP47-204ENST00000525078 TMEM177Q53S58 311 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms