RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 GOLGA8HP0CJ92 632 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 KCNQ1P51787 676 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 ZNF543Q08ER8 600 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 MCMDC2Q4G0Z9 681 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 CPVLQ9H3G5 476 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 TCP11L1Q9NUJ3 509 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 BDP1A6H8Y1 2624 aa30.46■■■□□ 2.47
PVT1-219ENST00000523427 PRRC2BQ5JSZ5 2229 aaKnown RBP30.45■■■□□ 2.47
PVT1-219ENST00000523427 NKRFO15226 690 aaKnown RBP eCLIP30.45■■■□□ 2.478e-7■■□□□ 12.5
PVT1-219ENST00000523427 NFRKBQ6P4R8 1299 aa30.45■■■□□ 2.47
PVT1-219ENST00000523427 MTCH2Q9Y6C9 303 aa30.45■■■□□ 2.47
PVT1-219ENST00000523427 EPOPA6NHQ4 379 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 A6NJR5 290 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 KPNA6O60684 536 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 HSPD1P10809 573 aaKnown RBP30.44■■■□□ 2.46
PVT1-219ENST00000523427 BMP1P13497 986 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 RFC2P35250 354 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 ZNF589Q86UQ0 364 aaPredicted RBP30.44■■■□□ 2.46
PVT1-219ENST00000523427 SLC9A7Q96T83 725 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 ZKSCAN3Q9BRR0 538 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 UBA5Q9GZZ9 404 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 PNMA2Q9UL42 364 aa30.44■■■□□ 2.46
PVT1-219ENST00000523427 ARHGEF15O94989 841 aa30.43■■■□□ 2.46
PVT1-219ENST00000523427 ARIH2O95376 493 aa30.43■■■□□ 2.46
PVT1-219ENST00000523427 PDE1AP54750 535 aa30.43■■■□□ 2.46
PVT1-219ENST00000523427 NMIQ13287 307 aaPredicted RBP30.43■■■□□ 2.46
PVT1-219ENST00000523427 BFSP2Q13515 415 aa30.43■■■□□ 2.46
PVT1-219ENST00000523427 MFSD6Q6ZSS7 791 aa30.43■■■□□ 2.46
PVT1-219ENST00000523427 CHST3Q7LGC8 479 aa30.43■■■□□ 2.46
PVT1-219ENST00000523427 B4DLN1 442 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 KIF28PB7ZC32 967 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 EDNRBP24530 442 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 MRPL12P52815 198 aaKnown RBP30.42■■■□□ 2.46
PVT1-219ENST00000523427 AAK1Q2M2I8 961 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 SEPT14Q6ZU15 432 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 HERC6Q8IVU3 1022 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 DNERQ8NFT8 737 aa30.42■■■□□ 2.46
PVT1-219ENST00000523427 PITPNM1O00562 1244 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 TAP1Q03518 808 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 PTGISQ16647 500 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 AFG1LQ8WV93 481 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 TBC1D5Q92609 795 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 TTC14Q96N46 770 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 WDR19Q8NEZ3 1342 aa30.41■■■□□ 2.46
PVT1-219ENST00000523427 TRIM6-TRIM34B2RNG4 842 aa30.4■■■□□ 2.46
PVT1-219ENST00000523427 TBC1D10CQ8IV04 446 aa30.4■■■□□ 2.46
PVT1-219ENST00000523427 PHOSPHO2Q8TCD6 241 aa30.4■■■□□ 2.46
PVT1-219ENST00000523427 SCN10AQ9Y5Y9 1956 aa30.4■■■□□ 2.46
PVT1-219ENST00000523427 PTPN11Q06124 597 aaPredicted RBP30.39■■■□□ 2.46
PVT1-219ENST00000523427 LY6KQ17RY6 165 aa30.39■■■□□ 2.46
PVT1-219ENST00000523427 SPRED2Q7Z698 418 aa30.39■■■□□ 2.46
PVT1-219ENST00000523427 TMCO2Q7Z6W1 182 aaPredicted RBP30.39■■■□□ 2.46
PVT1-219ENST00000523427 RILPL2Q969X0 211 aa30.39■■■□□ 2.46
PVT1-219ENST00000523427 RBAK-RBAKDNI3L0D1 243 aa30.38■■■□□ 2.45
PVT1-219ENST00000523427 TLL1O43897 1013 aa30.38■■■□□ 2.45
PVT1-219ENST00000523427 SNHG28P0DPA3 235 aa30.38■■■□□ 2.45
PVT1-219ENST00000523427 KCNJ6P48051 423 aa30.38■■■□□ 2.45
PVT1-219ENST00000523427 TAAR1Q96RJ0 339 aa30.38■■■□□ 2.45
PVT1-219ENST00000523427 REV3LO60673 3130 aa30.38■■■□□ 2.45
PVT1-219ENST00000523427 GDF6Q6KF10 455 aaPredicted RBP30.37■■■□□ 2.45
PVT1-219ENST00000523427 CCDC171Q6TFL3 1326 aa30.37■■■□□ 2.45
PVT1-219ENST00000523427 CDC37Q16543 378 aaPredicted RBP30.36■■■□□ 2.45
PVT1-219ENST00000523427 GPATCH4Q5T3I0 446 aaKnown RBP30.36■■■□□ 2.45
PVT1-219ENST00000523427 CCDC62Q6P9F0 684 aa30.36■■■□□ 2.45
PVT1-219ENST00000523427 TET1Q8NFU7 2136 aa30.36■■■□□ 2.45
PVT1-219ENST00000523427 ZBED2Q9BTP6 218 aa30.36■■■□□ 2.45
PVT1-219ENST00000523427 NEDD4P46934 1319 aa30.36■■■□□ 2.45
PVT1-219ENST00000523427 DHX16O60231 1041 aaKnown RBP30.35■■■□□ 2.45
PVT1-219ENST00000523427 GH1P01241 217 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 MMP3P08254 477 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 POU3F3P20264 500 aaPredicted RBP30.35■■■□□ 2.45
PVT1-219ENST00000523427 GRB10Q13322 594 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 CCDC155Q8N6L0 562 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 SYTL5Q8TDW5 730 aaPredicted RBP30.35■■■□□ 2.45
PVT1-219ENST00000523427 ESR2Q92731 530 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 RNF41Q9H4P4 317 aaPredicted RBP30.35■■■□□ 2.45
PVT1-219ENST00000523427 VAT1LQ9HCJ6 419 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 COL20A1Q9P218 1284 aa30.35■■■□□ 2.45
PVT1-219ENST00000523427 LCHNA4D1U4 455 aa30.34■■■□□ 2.45
PVT1-219ENST00000523427 CRBNQ96SW2 442 aa30.34■■■□□ 2.45
PVT1-219ENST00000523427 TRANK1O15050 2925 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 BAIAP3O94812 1187 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 ARHGAP1Q07960 439 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 PNMA1Q8ND90 353 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 RGS22Q8NE09 1264 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 NSUN6Q8TEA1 469 aaKnown RBP30.33■■■□□ 2.45
PVT1-219ENST00000523427 AFAP1L1Q8TED9 768 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 RMDN3Q96TC7 470 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 ALG1Q9BT22 464 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 LNPKQ9C0E8 428 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 MTUS1Q9ULD2 1270 aa30.33■■■□□ 2.45
PVT1-219ENST00000523427 TRIP12Q14669 1992 aaPredicted RBP30.32■■■□□ 2.44
PVT1-219ENST00000523427 ZMYM6O95789 1325 aa30.32■■■□□ 2.44
PVT1-219ENST00000523427 PCP11498 1178 aaKnown RBP30.32■■■□□ 2.44
PVT1-219ENST00000523427 CASTP20810 708 aaKnown RBP30.32■■■□□ 2.44
PVT1-219ENST00000523427 WDR5P61964 334 aaKnown RBP30.32■■■□□ 2.44
PVT1-219ENST00000523427 LRRC8DQ7L1W4 858 aa30.32■■■□□ 2.44
PVT1-219ENST00000523427 ADGRF4Q8IZF3 695 aa30.32■■■□□ 2.44
PVT1-219ENST00000523427 CAGE1Q8TC20 777 aa30.32■■■□□ 2.44
PVT1-219ENST00000523427 KAT2BQ92831 832 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms