RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CERS4Q9HA82 394 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 TOMM22Q9NS69 142 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 RAD50Q92878 1312 aa26.77■■□□□ 1.88
PVT1-218ENST00000523328 PDE4DQ08499 809 aa26.77■■□□□ 1.88
PVT1-218ENST00000523328 AAK1Q2M2I8 961 aa26.77■■□□□ 1.88
PVT1-218ENST00000523328 BRDTQ58F21 947 aaPredicted RBP26.77■■□□□ 1.88
PVT1-218ENST00000523328 DNERQ8NFT8 737 aa26.77■■□□□ 1.88
PVT1-218ENST00000523328 WDR19Q8NEZ3 1342 aa26.76■■□□□ 1.87
PVT1-218ENST00000523328 KPNA6O60684 536 aa26.76■■□□□ 1.87
PVT1-218ENST00000523328 FGAP02671 866 aa26.76■■□□□ 1.87
PVT1-218ENST00000523328 TAP1Q03518 808 aa26.76■■□□□ 1.87
PVT1-218ENST00000523328 PTPN11Q06124 597 aaPredicted RBP26.76■■□□□ 1.87
PVT1-218ENST00000523328 SKIV2LQ15477 1246 aaKnown RBP26.76■■□□□ 1.87
PVT1-218ENST00000523328 RRP12Q5JTH9 1297 aaKnown RBP26.76■■□□□ 1.87
PVT1-218ENST00000523328 HELLSQ9NRZ9 838 aa26.76■■□□□ 1.87
PVT1-218ENST00000523328 PNMA2Q9UL42 364 aa26.76■■□□□ 1.87
PVT1-218ENST00000523328 GTPBP6O43824 516 aaPredicted RBP26.75■■□□□ 1.87
PVT1-218ENST00000523328 ZNF543Q08ER8 600 aa26.75■■□□□ 1.87
PVT1-218ENST00000523328 KRT40Q6A162 431 aa26.75■■□□□ 1.87
PVT1-218ENST00000523328 HERC6Q8IVU3 1022 aa26.75■■□□□ 1.87
PVT1-218ENST00000523328 RETREG2Q8NC44 543 aa26.75■■□□□ 1.87
PVT1-218ENST00000523328 EVI5LQ96CN4 794 aa26.75■■□□□ 1.87
PVT1-218ENST00000523328 ARIH2O95376 493 aa26.74■■□□□ 1.87
PVT1-218ENST00000523328 SNHG28P0DPA3 235 aa26.74■■□□□ 1.87
PVT1-218ENST00000523328 TXNP10599 105 aaKnown RBP26.74■■□□□ 1.87
PVT1-218ENST00000523328 MPHOSPH6Q99547 160 aaKnown RBP26.74■■□□□ 1.87
PVT1-218ENST00000523328 BFSP2Q13515 415 aa26.73■■□□□ 1.87
PVT1-218ENST00000523328 FAM227BQ96M60 508 aa26.73■■□□□ 1.87
PVT1-218ENST00000523328 FTOQ9C0B1 505 aaKnown RBP eCLIP26.73■■□□□ 1.87
PVT1-218ENST00000523328 COL4A4P53420 1690 aaPredicted RBP26.73■■□□□ 1.87
PVT1-218ENST00000523328 KIAA1217Q5T5P2 1943 aa26.73■■□□□ 1.87
PVT1-218ENST00000523328 ZMYM6O95789 1325 aa26.72■■□□□ 1.87
PVT1-218ENST00000523328 A0A0D9SFI3 127 aa26.72■■□□□ 1.87
PVT1-218ENST00000523328 ARNTL2Q8WYA1 636 aa26.72■■□□□ 1.87
PVT1-218ENST00000523328 TTC14Q96N46 770 aa26.72■■□□□ 1.87
PVT1-218ENST00000523328 CTAGE1Q96RT6 745 aa26.72■■□□□ 1.87
PVT1-218ENST00000523328 BAIAP3O94812 1187 aa26.71■■□□□ 1.87
PVT1-218ENST00000523328 HSPD1P10809 573 aaKnown RBP26.71■■□□□ 1.87
PVT1-218ENST00000523328 CCDC62Q6P9F0 684 aa26.71■■□□□ 1.87
PVT1-218ENST00000523328 SPRED2Q7Z698 418 aa26.71■■□□□ 1.87
PVT1-218ENST00000523328 C1QTNF1Q9BXJ1 281 aa26.71■■□□□ 1.87
PVT1-218ENST00000523328 COG5Q9UP83 839 aa26.71■■□□□ 1.87
PVT1-218ENST00000523328 BRWD1Q9NSI6 2320 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 KIF28PB7ZC32 967 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 PLA2G5P39877 138 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 GPNMBQ14956 572 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 MCMDC2Q4G0Z9 681 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 RGS22Q8NE09 1264 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 NOD1Q9Y239 953 aa26.7■■□□□ 1.86
PVT1-218ENST00000523328 B4DLN1 442 aa26.69■■□□□ 1.86
PVT1-218ENST00000523328 LPXNO60711 386 aa26.69■■□□□ 1.86
PVT1-218ENST00000523328 MRPL12P52815 198 aaKnown RBP26.69■■□□□ 1.86
PVT1-218ENST00000523328 HAND2P61296 217 aa26.69■■□□□ 1.86
PVT1-218ENST00000523328 GRB10Q13322 594 aa26.69■■□□□ 1.86
PVT1-218ENST00000523328 PTGISQ16647 500 aa26.69■■□□□ 1.86
PVT1-218ENST00000523328 ZNF589Q86UQ0 364 aaPredicted RBP26.69■■□□□ 1.86
PVT1-218ENST00000523328 CAGE1Q8TC20 777 aa26.69■■□□□ 1.86
PVT1-218ENST00000523328 PDE1AP54750 535 aa26.68■■□□□ 1.86
PVT1-218ENST00000523328 USH1GQ495M9 461 aa26.68■■□□□ 1.86
PVT1-218ENST00000523328 SESTD1Q86VW0 696 aa26.68■■□□□ 1.86
PVT1-218ENST00000523328 AFAP1L1Q8TED9 768 aa26.68■■□□□ 1.86
PVT1-218ENST00000523328 AFG1LQ8WV93 481 aa26.68■■□□□ 1.86
PVT1-218ENST00000523328 MYH6P13533 1939 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 TLL1O43897 1013 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 MMP3P08254 477 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 CHMP4BP1P59074 171 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 WDR5P61964 334 aaKnown RBP26.67■■□□□ 1.86
PVT1-218ENST00000523328 ANKRD45Q5TZF3 282 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 GDF6Q6KF10 455 aaPredicted RBP26.67■■□□□ 1.86
PVT1-218ENST00000523328 TBC1D10CQ8IV04 446 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 TBC1D5Q92609 795 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 KAT2BQ92831 832 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 CPVLQ9H3G5 476 aa26.67■■□□□ 1.86
PVT1-218ENST00000523328 LCHNA4D1U4 455 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 GOLGA8HP0CJ92 632 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 PCP11498 1178 aaKnown RBP26.66■■□□□ 1.86
PVT1-218ENST00000523328 ARHGAP1Q07960 439 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 LY6KQ17RY6 165 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 GPATCH4Q5T3I0 446 aaKnown RBP26.66■■□□□ 1.86
PVT1-218ENST00000523328 MFSD6Q6ZSS7 791 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 CCDC155Q8N6L0 562 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 DHX38Q92620 1227 aaKnown RBP26.66■■□□□ 1.86
PVT1-218ENST00000523328 HLA-CQ95604 372 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 UBA5Q9GZZ9 404 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 COL20A1Q9P218 1284 aa26.66■■□□□ 1.86
PVT1-218ENST00000523328 GH1P01241 217 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 KCNJ6P48051 423 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 RBL2Q08999 1139 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 NMIQ13287 307 aaPredicted RBP26.65■■□□□ 1.86
PVT1-218ENST00000523328 SEPT14Q6ZU15 432 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 TMCO2Q7Z6W1 182 aaPredicted RBP26.65■■□□□ 1.86
PVT1-218ENST00000523328 TICAM2Q86XR7 235 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 TAAR1Q96RJ0 339 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 MAF1Q9H063 256 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 EPHX3Q9H6B9 360 aa26.65■■□□□ 1.86
PVT1-218ENST00000523328 SELPP16109 830 aa26.64■■□□□ 1.86
PVT1-218ENST00000523328 SYTL5Q8TDW5 730 aaPredicted RBP26.64■■□□□ 1.86
PVT1-218ENST00000523328 FAM122AQ96E09 287 aa26.64■■□□□ 1.86
PVT1-218ENST00000523328 MYH7BA7E2Y1 1941 aa26.64■■□□□ 1.86
PVT1-218ENST00000523328 NEDD4P46934 1319 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms