RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
PVT1-215ENST00000522963 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
PVT1-215ENST00000522963 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
PVT1-215ENST00000522963 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 H3BQV1 296 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 MEIS2O14770 477 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 STX6O43752 255 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 SGPL1O95470 568 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 CALML3P27482 149 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 GJA8P48165 433 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 PKP1Q13835 747 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 UBE2SQ16763 222 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 ANO1Q5XXA6 986 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 RGS22Q8NE09 1264 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 TRPV1Q8NER1 839 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 CUL5Q93034 780 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 PAK6Q9NQU5 681 aaPredicted RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
PVT1-215ENST00000522963 DIS3Q9Y2L1 958 aaKnown RBP13.67□□□□□ -0.22
PVT1-215ENST00000522963 PFASO15067 1338 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 CFBP00751 764 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 GNA11P29992 359 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 KRT2P35908 639 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 HSD17B4P51659 736 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
PVT1-215ENST00000522963 GHRHRQ02643 423 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 USP17L6PQ6QN14 398 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
PVT1-215ENST00000522963 MCF2L2Q86YR7 1114 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
PVT1-215ENST00000522963 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 CYP39A1Q9NYL5 469 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
PVT1-215ENST00000522963 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
PVT1-215ENST00000522963 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 KIF28PB7ZC32 967 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
PVT1-215ENST00000522963 M0R2N6 131 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 CYBAP13498 195 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
PVT1-215ENST00000522963 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
PVT1-215ENST00000522963 RGS19P49795 217 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 RPS6P62753 249 aaKnown RBP13.65□□□□□ -0.22
PVT1-215ENST00000522963 NR5A1Q13285 461 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 SAFBQ15424 915 aaKnown RBP eCLIP13.65□□□□□ -0.22
PVT1-215ENST00000522963 SLC30A10Q6XR72 485 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 FAM133AQ8N9E0 248 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 GLT8D2Q9H1C3 349 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 BRMS1Q9HCU9 246 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
PVT1-215ENST00000522963 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
PVT1-215ENST00000522963 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 MCTP1Q6DN14 999 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 ARMCX2Q7L311 632 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 EEPD1Q7L9B9 569 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 FGD4Q96M96 766 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 MAF1Q9H063 256 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 COL20A1Q9P218 1284 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 DDX20Q9UHI6 824 aaKnown RBP13.64□□□□□ -0.23
PVT1-215ENST00000522963 HTTP42858 3142 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 LCTP09848 1927 aa13.64□□□□□ -0.23
PVT1-215ENST00000522963 ASB14A6NK59 587 aa13.63□□□□□ -0.23
PVT1-215ENST00000522963 BRD1O95696 1058 aa13.63□□□□□ -0.23
PVT1-215ENST00000522963 SNAI1O95863 264 aaPredicted RBP13.63□□□□□ -0.23
PVT1-215ENST00000522963 ZSCAN22P10073 491 aaPredicted RBP13.63□□□□□ -0.23
PVT1-215ENST00000522963 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
PVT1-215ENST00000522963 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■□□□ 11.9
PVT1-215ENST00000522963 RESTQ13127 1097 aa13.63□□□□□ -0.23
PVT1-215ENST00000522963 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
PVT1-215ENST00000522963 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
PVT1-215ENST00000522963 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms