RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 IQCF3P0C7M6 154 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 GOLGA8HP0CJ92 632 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 BMP1P13497 986 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 NMIQ13287 307 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 NFRKBQ6P4R8 1299 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 SPRED2Q7Z698 418 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 SCFD2Q8WU76 684 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 TBC1D5Q92609 795 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 CTAGE1Q96RT6 745 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 MTCH2Q9Y6C9 303 aa17.96■□□□□ 0.47
TRAPPC9-213ENST00000522504 WDR19Q8NEZ3 1342 aa17.96■□□□□ 0.46
TRAPPC9-213ENST00000522504 TXNP10599 105 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 GPNMBQ14956 572 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 USH1GQ495M9 461 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 CCDC62Q6P9F0 684 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 ZKSCAN3Q9BRR0 538 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 UBA5Q9GZZ9 404 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 ZMYM6O95789 1325 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 NEDD4P46934 1319 aa17.95■□□□□ 0.46
TRAPPC9-213ENST00000522504 PITPNM1O00562 1244 aa17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 NKRFO15226 690 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 KCNQ1P51787 676 aa17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 TAP1Q03518 808 aa17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 DNERQ8NFT8 737 aa17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 TTC14Q96N46 770 aa17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 COL20A1Q9P218 1284 aa17.94■□□□□ 0.46
TRAPPC9-213ENST00000522504 POU3F3P20264 500 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 RFC2P35250 354 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 CHMP4BP1P59074 171 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 TMCO2Q7Z6W1 182 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 HERC6Q8IVU3 1022 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 AFG1LQ8WV93 481 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 CRBNQ96SW2 442 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.461e-10■■■■■ 27.2
TRAPPC9-213ENST00000522504 TET1Q8NFU7 2136 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 RAD50Q92878 1312 aa17.93■□□□□ 0.46
TRAPPC9-213ENST00000522504 KPNA6O60684 536 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 ACTN1P12814 892 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 PTPN11Q06124 597 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 GDF6Q6KF10 455 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 RETREG2Q8NC44 543 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 PHOSPHO2Q8TCD6 241 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 ARNTL2Q8WYA1 636 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 DHX38Q92620 1227 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 KAT2BQ92831 832 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 TAAR1Q96RJ0 339 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 SLC9A7Q96T83 725 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 PNMA2Q9UL42 364 aa17.92■□□□□ 0.46
TRAPPC9-213ENST00000522504 RRP1P56182 461 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 ARHGAP1Q07960 439 aa17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 SKIV2LQ15477 1246 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 PTGISQ16647 500 aa17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 TCTN1Q2MV58 587 aa17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 SEPT14Q6ZU15 432 aa17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 SYTL5Q8TDW5 730 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 TSPYL2Q9H2G4 693 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 TCF20Q9UGU0 1960 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-213ENST00000522504 LCHNA4D1U4 455 aa17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 LPXNO60711 386 aa17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 MMP3P08254 477 aa17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 BFSP2Q13515 415 aa17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 HDAC1Q13547 482 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 CDC37Q16543 378 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 NOD1Q9Y239 953 aa17.9■□□□□ 0.46
TRAPPC9-213ENST00000522504 TANC1Q9C0D5 1861 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 TRIM6-TRIM34B2RNG4 842 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 PCP11498 1178 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 GRB10Q13322 594 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 ADGRF4Q8IZF3 695 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 MPHOSPH6Q99547 160 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 LNPKQ9C0E8 428 aa17.89■□□□□ 0.45
TRAPPC9-213ENST00000522504 GTPBP6O43824 516 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 SDSP20132 328 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 WDR5P61964 334 aaKnown RBP17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 DEFB103AP81534 67 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 SESTD1Q86VW0 696 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 TICAM2Q86XR7 235 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 PNMA1Q8ND90 353 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 ESR2Q92731 530 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
TRAPPC9-213ENST00000522504 TLL1O43897 1013 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 NBNO60934 754 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 KDM4AO75164 1064 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 BAIAP3O94812 1187 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 GH1P01241 217 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 QRICH1Q2TAL8 776 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 CAGE1Q8TC20 777 aa17.87■□□□□ 0.45
TRAPPC9-213ENST00000522504 NSUN6Q8TEA1 469 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms