RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TAF1CQ15572 869 aaPredicted RBP24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 ANKRD35Q8N283 1001 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 NAP1L4Q99733 375 aaKnown RBP24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 A1CFQ9NQ94 594 aaKnown RBP24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 CYP39A1Q9NYL5 469 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 MRVI1Q9Y6F6 885 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 CCNA1P78396 465 aa24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 COL13A1Q5TAT6 717 aaPredicted RBP24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 WDR78Q5VTH9 848 aa24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 CAPNS2Q96L46 248 aa24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 TAAR1Q96RJ0 339 aa24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 MAF1Q9H063 256 aa24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 A0A0G2JMZ2 1700 aa24.29■■□□□ 1.48
R3HCC1-208ENST00000522012 TM4SF4P48230 202 aa24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 ATP2C1P98194 919 aaPredicted RBP24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 NOGQ13253 232 aa24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 PPP4R3AQ6IN85 833 aa24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 CRYGNQ8WXF5 182 aa24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 PURBQ96QR8 312 aaKnown RBP24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 MROH8Q9H579 483 aa24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 MORF4L1Q9UBU8 362 aa24.28■■□□□ 1.48
R3HCC1-208ENST00000522012 NEMFO60524 1076 aa24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 GCFC2P16383 781 aaKnown RBP24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 ZNF76P36508 570 aa24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 ORC2Q13416 577 aaPredicted RBP24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 C4orf32Q8N8J7 132 aa24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 KRI1Q8N9T8 703 aaKnown RBP24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 SHCBP1Q8NEM2 672 aa24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 R3HDMLQ9H3Y0 253 aa24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 DDX25Q9UHL0 483 aaKnown RBP24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 DDX49Q9Y6V7 483 aaKnown RBP24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 COL11A1P12107 1806 aaPredicted RBP24.27■■□□□ 1.48
R3HCC1-208ENST00000522012 PFASO15067 1338 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 AOC2O75106 756 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 CYP3A4P08684 503 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 ARHGEF16Q5VV41 709 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 CCAR1Q8IX12 1150 aaKnown RBP24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 RMDN3Q96TC7 470 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 TMEM60Q9H2L4 133 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 CPA4Q9UI42 421 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 FBXO2Q9UK22 296 aaPredicted RBP24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 MYH15Q9Y2K3 1946 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 RPTORQ8N122 1335 aa24.26■■□□□ 1.47
R3HCC1-208ENST00000522012 SLC37A4O43826 429 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 TRAK2O60296 914 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 PTPREP23469 700 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 ADALQ6DHV7 355 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 POTEDQ86YR6 584 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 CLIC6Q96NY7 704 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 PORCNQ9H237 461 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 EFCC1Q9HA90 598 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 SRPRBQ9Y5M8 271 aaKnown RBP24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 MORC2Q9Y6X9 1032 aaPredicted RBP24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 SMCHD1A6NHR9 2005 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 CYP3A7-CYP3A51PA0A087WV96 503 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 CUTAO60888 179 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 EIF2AK2P19525 551 aaKnown RBP24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 CYP3A7P24462 503 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 SKOR2Q2VWA4 1001 aaPredicted RBP24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 AXDND1Q5T1B0 1012 aaPredicted RBP24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 MOXD1Q6UVY6 613 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 GPT2Q8TD30 523 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 MMP19Q99542 508 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 ZFYVE28Q9HCC9 887 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 PXMP2Q9NR77 195 aa24.25■■□□□ 1.47
R3HCC1-208ENST00000522012 LAD1O00515 517 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 OR52Z1P0C646 297 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 CIITAP33076 1130 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 KCTD2Q14681 263 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 CALCRLQ16602 461 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 FAM110CQ1W6H9 321 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 FERMT2Q96AC1 680 aa24.24■■□□□ 1.47
R3HCC1-208ENST00000522012 POTEB2H3BUK9 544 aa24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 MARCH6O60337 910 aa24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 MBD3O95983 291 aa24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 HSPA1AP0DMV8 641 aaKnown RBP24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 HSPA1BP0DMV9 641 aaKnown RBP24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 FCER1AP12319 257 aa24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 GRIN1Q05586 938 aa24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 PRR16Q569H4 304 aa24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 ARL6IP4Q66PJ3 421 aaKnown RBP24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 NSUN6Q8TEA1 469 aaKnown RBP24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 ZFP91Q96JP5 570 aaPredicted RBP24.23■■□□□ 1.47
R3HCC1-208ENST00000522012 ADGRA2Q96PE1 1338 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 A0A1W2PQ27 194 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 A0A1W2PQ64 194 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 A0A1W2PQD8 194 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 VWA3AA6NCI4 1184 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 FAM86B1E9PN63 330 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 FAM86B2P0C5J1 330 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 PGM5Q15124 567 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 DTHD1Q6ZMT9 781 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 IL31RAQ8NI17 732 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 MBOAT7Q96N66 472 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 PDCD2LQ9BRP1 358 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 FRMPD4Q14CM0 1322 aa24.22■■□□□ 1.47
R3HCC1-208ENST00000522012 PCNTO95613 3336 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 TLR2O60603 784 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 MYCLP12524 364 aaPredicted RBP24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 PRPHP41219 470 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms