RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 AP3B2Q13367 1082 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 GNL2Q13823 731 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 USH1GQ495M9 461 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ARHGEF16Q5VV41 709 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 TMTC3Q6ZXV5 915 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 CHST3Q7LGC8 479 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 HEATR3Q7Z4Q2 680 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 SMAP1Q8IYB5 467 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ANKLE1Q8NAG6 615 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 FAM184AQ8NB25 1140 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ANP32BQ92688 251 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 KHSRPQ92945 711 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ARMC5Q96C12 935 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 PDLIM2Q96JY6 352 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 HTATIP2Q9BUP3 242 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 IL25Q9H293 177 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ABHD16BQ9H3Z7 469 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 RIOX1Q9H6W3 641 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 VAT1LQ9HCJ6 419 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 VTA1Q9NP79 307 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 SH3GLB2Q9NR46 395 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 FBXO28Q9NVF7 368 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 BTBD7Q9P203 1132 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 MAD2L2Q9UI95 211 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 FAM184BQ9ULE4 1060 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 LIMCH1Q9UPQ0 1083 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 HPS5Q9UPZ3 1129 aa6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-220ENST00000520260 NID2Q14112 1375 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 A0A0G2JMZ2 1700 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 CCDC85CA6NKD9 419 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 K7ELQ4 463 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 INHAP05111 366 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 SLURP2P0DP57 97 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 AKR1A1P14550 325 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 IFNAR1P17181 557 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 PDCP20941 246 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 MSNP26038 577 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 CCND2P30279 289 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 SLC16A2P36021 539 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 STXBP2Q15833 593 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 CSPP1Q1MSJ5 1256 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 SHROOM1Q2M3G4 852 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 QRICH1Q2TAL8 776 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 MORN1Q5T089 497 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 STOX1Q6ZVD7 989 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 RNF180Q86T96 592 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 NLRX1Q86UT6 975 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 SPRYD3Q8NCJ5 442 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 IL17RAQ96F46 866 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 ABHD8Q96I13 439 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 LLPHQ9BRT6 129 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 TINF2Q9BSI4 451 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 AGXT2Q9BYV1 514 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 UPF3BQ9BZI7 483 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 AP5M1Q9H0R1 490 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 RNF208Q9H0X6 261 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 PORCNQ9H237 461 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 PSTPIP2Q9H939 334 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 TXNRD2Q9NNW7 524 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 INCENPQ9NQS7 918 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 GPHNQ9NQX3 736 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 PRDM4Q9UKN5 801 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 NOL7Q9UMY1 257 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 PTCH2Q9Y6C5 1203 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 STK36Q9NRP7 1315 aa6.45□□□□□ -1.38
CTNNA1-220ENST00000520260 ESYT2A0FGR8 921 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 DYNC1I1O14576 645 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 MAFGO15525 162 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 KPNA6O60684 536 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 CNMDO75829 334 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 CFBP00751 764 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 TFRCP02786 760 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 GJB1P08034 283 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 SCG2P13521 617 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 PSEN1P49768 467 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 CPT1AP50416 773 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 EVCP57679 992 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 ANTXR2P58335 489 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 SETQ01105 290 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 APOBRQ0VD83 1088 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 TTLL4Q14679 1199 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 MAMDC4Q6UXC1 1216 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 REXO1Q8N1G1 1221 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 PCSK9Q8NBP7 692 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 SCFD2Q8WU76 684 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 MAML3Q96JK9 1138 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 ZNF333Q96JL9 665 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 RMDN3Q96TC7 470 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 KIF2CQ99661 725 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 UBA5Q9GZZ9 404 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 JMJD4Q9H9V9 463 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 A1CFQ9NQ94 594 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 BARHL2Q9NY43 387 aa6.44□□□□□ -1.38
CTNNA1-220ENST00000520260 CYP39A1Q9NYL5 469 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms