RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 PAMP19021 973 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 GDF5P43026 501 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 SEPHS1P49903 392 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 PPP2R5DQ14738 602 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 PRR31Q5SQ13 230 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 BORAQ6PGQ7 559 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 RUFY4Q6ZNE9 571 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 FAM124AQ86V42 546 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 CPNE8Q86YQ8 564 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 TTLL6Q8N841 843 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 TXNDC5Q8NBS9 432 aaKnown RBP3.23□□□□□ -1.89
CCNC-208ENST00000519617 HAUS7Q99871 368 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 KLHL25Q9H0H3 589 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 FAM86C1Q9NVL1 165 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 GULP1Q9UBP9 304 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 TSC22D4Q9Y3Q8 395 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 BACE2Q9Y5Z0 518 aa3.23□□□□□ -1.89
CCNC-208ENST00000519617 NPHP3-ACAD11A0A0J9YXS1 232 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 C7orf72A4D263 438 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 C9orf118A6NHY6 69 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 STXBP3O00186 592 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 CYR61O00622 381 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 NPHS1O60500 1241 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 NTRK1P04629 796 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 TACR2P21452 398 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 ACVRL1P37023 503 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 HMGA2P52926 109 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 GRB10Q13322 594 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 CDSNQ15517 529 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 SURF1Q15526 300 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 LDLRAD1Q5T700 205 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 CRIP3Q6Q6R5 217 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 GLB1LQ6UWU2 654 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 ETV3LQ6ZN32 361 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 LIMS2Q7Z4I7 341 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 SPRED1Q7Z699 444 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 MIB1Q86YT6 1006 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 Q8N1X5 172 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 ARHGEF39Q8N4T4 335 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 PLEKHO2Q8TD55 490 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 USP33Q8TEY7 942 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 RCC1LQ96I51 464 aaKnown RBP3.22□□□□□ -1.89
CCNC-208ENST00000519617 SYT3Q9BQG1 590 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 SCAND2PQ9GZW5 306 aaPredicted RBP3.22□□□□□ -1.89
CCNC-208ENST00000519617 ST6GALNAC2Q9UJ37 374 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 SIT1Q9Y3P8 196 aa3.22□□□□□ -1.89
CCNC-208ENST00000519617 ZNF536O15090 1300 aa3.21□□□□□ -1.89
CCNC-208ENST00000519617 OVOL3O00110 214 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 PPM1BO75688 479 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 SLPIP03973 132 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 FUCA1P04066 466 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 ITGA1P56199 1179 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 AMPD2Q01433 879 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 DPY19L1Q2PZI1 675 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 GNPTABQ3T906 1256 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 ZNF326Q5BKZ1 582 aaKnown RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 C9orf131Q5VYM1 1079 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 FBXW10Q5XX13 1052 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 HEATR6Q6AI08 1181 aaKnown RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 MCTP2Q6DN12 878 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 DCP2Q8IU60 420 aaKnown RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 FAM26EQ8N5C1 309 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 ADCY4Q8NFM4 1077 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 SH3RF3Q8TEJ3 882 aaPredicted RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 DPF3Q92784 378 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 KISS1RQ969F8 398 aaPredicted RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 LCORQ96JN0 433 aaPredicted RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 MRIQ9BWK5 157 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 GBP3Q9H0R5 595 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 PHAXQ9H814 394 aaKnown RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 CGGBP1Q9UFW8 167 aaPredicted RBP3.21□□□□□ -1.9
CCNC-208ENST00000519617 PPT2Q9UMR5 302 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 SLC12A7Q9Y666 1083 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 SCRIBQ14160 1630 aa3.21□□□□□ -1.9
CCNC-208ENST00000519617 DDX3XO00571 662 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCNC-208ENST00000519617 SGSM2O43147 1006 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 LAMTOR5O43504 91 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 B4GALT3O60512 393 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 EPHX1P07099 455 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 CCDC27Q2M243 656 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 CD300LDQ6UXZ3 194 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 ADAT2Q7Z6V5 191 aaKnown RBP3.2□□□□□ -1.9
CCNC-208ENST00000519617 ZC3H18Q86VM9 953 aaKnown RBP3.2□□□□□ -1.9
CCNC-208ENST00000519617 SEC14L1Q92503 715 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 COPS5Q92905 334 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 CDK5RAP1Q96SZ6 601 aaKnown RBP3.2□□□□□ -1.9
CCNC-208ENST00000519617 MMP19Q99542 508 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 MENTQ9BUN1 341 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 BCL2L13Q9BXK5 485 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 AP5M1Q9H0R1 490 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 CD248Q9HCU0 757 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 NGRNQ9NPE2 291 aaKnown RBP3.2□□□□□ -1.9
CCNC-208ENST00000519617 PPP4R1LQ9P1A2 415 aa3.2□□□□□ -1.9
CCNC-208ENST00000519617 FZD7O75084 574 aa3.19□□□□□ -1.9
CCNC-208ENST00000519617 ZNF28P17035 718 aa3.19□□□□□ -1.9
CCNC-208ENST00000519617 ZNF76P36508 570 aa3.19□□□□□ -1.9
CCNC-208ENST00000519617 SLC6A11P48066 632 aa3.19□□□□□ -1.9
CCNC-208ENST00000519617 SLC7A5Q01650 507 aa3.19□□□□□ -1.9
CCNC-208ENST00000519617 COL9A2Q14055 689 aaPredicted RBP3.19□□□□□ -1.9
CCNC-208ENST00000519617 ICAM4Q14773 271 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms