RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 HOXA13P31271 388 aaPredicted RBP20.77■□□□□ 0.91
FAM49B-214ENST00000519540 SREBF1P36956 1147 aa20.77■□□□□ 0.91
FAM49B-214ENST00000519540 STX17P56962 302 aa20.77■□□□□ 0.91
FAM49B-214ENST00000519540 HSP90AA4PQ58FG1 418 aa20.77■□□□□ 0.91
FAM49B-214ENST00000519540 GJA10Q969M2 543 aa20.77■□□□□ 0.91
FAM49B-214ENST00000519540 NAP1L5Q96NT1 182 aaPredicted RBP20.77■□□□□ 0.91
FAM49B-214ENST00000519540 C7orf25Q9BPX7 421 aa20.77■□□□□ 0.91
FAM49B-214ENST00000519540 FBXO28Q9NVF7 368 aa20.77■□□□□ 0.91
FAM49B-214ENST00000519540 CDK11BP21127 795 aaKnown RBP20.76■□□□□ 0.91
FAM49B-214ENST00000519540 ARID5BQ14865 1188 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 NOLC1Q14978 699 aaKnown RBP eCLIP20.76■□□□□ 0.91
FAM49B-214ENST00000519540 KMT5BQ4FZB7 885 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 KRT79Q5XKE5 535 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 TMC6Q7Z403 805 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 NUDT12Q9BQG2 462 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 BLOC1S4Q9NUP1 217 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 STK17AQ9UEE5 414 aa20.76■□□□□ 0.91
FAM49B-214ENST00000519540 RHOBTB3O94955 611 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 INPP5BP32019 993 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 AMPD3Q01432 767 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 TRIM9Q9C026 710 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 KIAA1683Q9H0B3 1180 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 GPRC5DQ9NZD1 345 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 GDAQ9Y2T3 454 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 OFD1O75665 1012 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 LMNB1P20700 586 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 GSDMDP57764 484 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 Q4G0T1 1027 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 ANGEL2Q5VTE6 544 aaKnown RBP20.75■□□□□ 0.91
FAM49B-214ENST00000519540 GPC2Q8N158 579 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 C17orf53Q8N3J3 647 aaPredicted RBP20.75■□□□□ 0.91
FAM49B-214ENST00000519540 LPAR1Q92633 364 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 CDK5RAP3Q96JB5 506 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 RWDD2AQ9UIY3 292 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 CTNND2Q9UQB3 1225 aa20.75■□□□□ 0.91
FAM49B-214ENST00000519540 PRCPP42785 496 aa20.74■□□□□ 0.91
FAM49B-214ENST00000519540 DCAF15Q66K64 600 aa20.74■□□□□ 0.91
FAM49B-214ENST00000519540 APOBEC3FQ8IUX4 373 aaKnown RBP20.74■□□□□ 0.91
FAM49B-214ENST00000519540 DICER1Q9UPY3 1922 aaKnown RBP20.73■□□□□ 0.91
FAM49B-214ENST00000519540 WDR46O15213 610 aaKnown RBP20.73■□□□□ 0.91
FAM49B-214ENST00000519540 CIITAP33076 1130 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 TMEM119Q4V9L6 283 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 CDKAL1Q5VV42 579 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
FAM49B-214ENST00000519540 SV2BQ7L1I2 683 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 SLFN12Q8IYM2 578 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 TRPM4Q8TD43 1214 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 TBC1D5Q92609 795 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 SPTLC3Q9NUV7 552 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 INTS13Q9NVM9 706 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 MRPL11Q9Y3B7 192 aaKnown RBP20.73■□□□□ 0.91
FAM49B-214ENST00000519540 TBX3O15119 743 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 CFBP00751 764 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 CYP3A4P08684 503 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 PAK1Q13153 545 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 PRR16Q569H4 304 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 LDHDQ86WU2 507 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 ADSSL1Q8N142 457 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 GIMAP8Q8ND71 665 aaPredicted RBP20.73■□□□□ 0.91
FAM49B-214ENST00000519540 ETNPPLQ8TBG4 499 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 LENG9Q96B70 501 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 ZNF112Q9UJU3 913 aa20.73■□□□□ 0.91
FAM49B-214ENST00000519540 FAM86B1E9PN63 330 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
FAM49B-214ENST00000519540 FAM86B2P0C5J1 330 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 DHX8Q14562 1220 aaKnown RBP20.72■□□□□ 0.91
FAM49B-214ENST00000519540 MCM6Q14566 821 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 FCHSD1Q86WN1 690 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 VSTM4Q8IW00 320 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 PRPF38AQ8NAV1 312 aaKnown RBP20.72■□□□□ 0.91
FAM49B-214ENST00000519540 NELFBQ8WX92 580 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 LARP4BQ92615 738 aaKnown RBP20.72■□□□□ 0.91
FAM49B-214ENST00000519540 RAD54LQ92698 747 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 UIMC1Q96RL1 719 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 ABCB11O95342 1321 aa20.72■□□□□ 0.91
FAM49B-214ENST00000519540 ECM1Q16610 540 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 HYIQ5T013 277 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 MAPK8IP1Q9UQF2 711 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 ASIC1P78348 528 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 PRAMEF18Q5VWM3 479 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 KCNK18Q7Z418 384 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 CCDC47Q96A33 483 aaKnown RBP20.71■□□□□ 0.91
FAM49B-214ENST00000519540 SLF1Q9BQI6 1058 aa20.71■□□□□ 0.91
FAM49B-214ENST00000519540 FHDC1Q9C0D6 1143 aaPredicted RBP20.71■□□□□ 0.91
FAM49B-214ENST00000519540 COBLO75128 1261 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 EPS15P42566 896 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 APTXQ7Z2E3 356 aaKnown RBP20.7■□□□□ 0.9
FAM49B-214ENST00000519540 SCYL3Q8IZE3 742 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 FAM20AQ96MK3 541 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 ZNF536O15090 1300 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 MYMKA6NI61 221 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 SLC26A4O43511 780 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 ICAM1P05362 532 aa20.7■□□□□ 0.9
FAM49B-214ENST00000519540 CCT6AP40227 531 aaKnown RBP20.7■□□□□ 0.9
FAM49B-214ENST00000519540 HIRAP54198 1017 aaPredicted RBP20.7■□□□□ 0.9
FAM49B-214ENST00000519540 PDE4DQ08499 809 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms