RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 BAZ2BQ9UIF8 2168 aaKnown RBP10.29□□□□□ -0.76
TRIM35-202ENST00000519219 HSPD1P10809 573 aaKnown RBP10.29□□□□□ -0.76
TRIM35-202ENST00000519219 PDE1AP54750 535 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 CHMP4BP1P59074 171 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 PDE4DQ08499 809 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 GPNMBQ14956 572 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 PPP2R5BQ15173 497 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 USH1GQ495M9 461 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 RPUSD2Q8IZ73 545 aaKnown RBP10.29□□□□□ -0.76
TRIM35-202ENST00000519219 EVI5LQ96CN4 794 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 MTG1Q9BT17 334 aaPredicted RBP10.29□□□□□ -0.76
TRIM35-202ENST00000519219 UBA5Q9GZZ9 404 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 POLR3EQ9NVU0 708 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 COL20A1Q9P218 1284 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 ADD3Q9UEY8 706 aaKnown RBP10.29□□□□□ -0.76
TRIM35-202ENST00000519219 MTCH2Q9Y6C9 303 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 DOCK5Q9H7D0 1870 aa10.29□□□□□ -0.76
TRIM35-202ENST00000519219 XIRP2A4UGR9 3374 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 LCHNA4D1U4 455 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 A6NJR5 290 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 CENPBP07199 599 aaPredicted RBP10.28□□□□□ -0.76
TRIM35-202ENST00000519219 IQCF3P0C7M6 154 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 SNHG28P0DPA3 235 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 BMP1P13497 986 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 CPT1AP50416 773 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 TAP1Q03518 808 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 TMEM67Q5HYA8 995 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 DHX38Q92620 1227 aaKnown RBP10.28□□□□□ -0.76
TRIM35-202ENST00000519219 CRBNQ96SW2 442 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 TCP11L1Q9NUJ3 509 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 SIP14410 1827 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 MICAL3Q7RTP6 2002 aa10.28□□□□□ -0.76
TRIM35-202ENST00000519219 SUPT20HL2P0C7V6 817 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 TXNP10599 105 aaKnown RBP10.27□□□□□ -0.77
TRIM35-202ENST00000519219 ARHGAP1Q07960 439 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 LY6KQ17RY6 165 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 MCMDC2Q4G0Z9 681 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 GDF6Q6KF10 455 aaPredicted RBP10.27□□□□□ -0.77
TRIM35-202ENST00000519219 CCDC62Q6P9F0 684 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 SCFD2Q8WU76 684 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 AFG1LQ8WV93 481 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 KAT2BQ92831 832 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 TAAR1Q96RJ0 339 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 SEZ6LQ9BYH1 1024 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 FTOQ9C0B1 505 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRIM35-202ENST00000519219 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.77
TRIM35-202ENST00000519219 CCDC171Q6TFL3 1326 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 WDR19Q8NEZ3 1342 aa10.27□□□□□ -0.77
TRIM35-202ENST00000519219 LPXNO60711 386 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 PFKMP08237 780 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 MMP3P08254 477 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 RRP1P56182 461 aaKnown RBP10.26□□□□□ -0.77
TRIM35-202ENST00000519219 DEFB103AP81534 67 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 SKIV2LQ15477 1246 aaKnown RBP10.26□□□□□ -0.77
TRIM35-202ENST00000519219 CDC37Q16543 378 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-202ENST00000519219 NFRKBQ6P4R8 1299 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 CHST3Q7LGC8 479 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 HERC6Q8IVU3 1022 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 SYTL5Q8TDW5 730 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-202ENST00000519219 KHSRPQ92945 711 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRIM35-202ENST00000519219 WNT8BQ93098 351 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 LNPKQ9C0E8 428 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 ATG2AQ2TAZ0 1938 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 ZMYM6O95789 1325 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 MYO7AQ13402 2215 aa10.26□□□□□ -0.77
TRIM35-202ENST00000519219 LOC102724159A0A0B4J2E5 919 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 OPLAHO14841 1288 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 NKRFO15226 690 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIM35-202ENST00000519219 SORBS3O60504 671 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 NBNO60934 754 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 WDR5P61964 334 aaKnown RBP10.25□□□□□ -0.77
TRIM35-202ENST00000519219 GRB10Q13322 594 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 HIC1Q14526 733 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 PWP2Q15269 919 aaKnown RBP10.25□□□□□ -0.77
TRIM35-202ENST00000519219 PTGISQ16647 500 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 MFSD6Q6ZSS7 791 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 ADGRF4Q8IZF3 695 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 RETREG2Q8NC44 543 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 DNERQ8NFT8 737 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 GDPD5Q8WTR4 605 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 RILPL2Q969X0 211 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 SLC9A7Q96T83 725 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 RAD50Q92878 1312 aa10.25□□□□□ -0.77
TRIM35-202ENST00000519219 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 B4E1Z4 1266 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 KDM4AO75164 1064 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 ZNF286BP0CG31 522 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 ACTN1P12814 892 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 POU3F3P20264 500 aaPredicted RBP10.24□□□□□ -0.77
TRIM35-202ENST00000519219 RFC2P35250 354 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 ZNF200P98182 395 aaPredicted RBP10.24□□□□□ -0.77
TRIM35-202ENST00000519219 MBTPS1Q14703 1052 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 QRICH1Q2TAL8 776 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 TRAF7Q6Q0C0 670 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 PNMA1Q8ND90 353 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms