RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 ZNF200P98182 395 aaPredicted RBP5.78□□□□□ -1.48
SKP1-205ENST00000519054 KCNAB2Q13303 367 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 RASGRF1Q13972 1273 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 SLC35F1Q5T1Q4 408 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 ACBD5Q5T8D3 534 aaPredicted RBP5.78□□□□□ -1.48
SKP1-205ENST00000519054 TEX2Q8IWB9 1127 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 LRRC47Q8N1G4 583 aaKnown RBP5.78□□□□□ -1.48
SKP1-205ENST00000519054 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
SKP1-205ENST00000519054 TIMM13Q9Y5L4 95 aaPredicted RBP5.78□□□□□ -1.48
SKP1-205ENST00000519054 DBX1A6NMT0 343 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 C22orf46C9J442 243 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 MYO1BO43795 1136 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 DLX3O60479 287 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 NTRK1P04629 796 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 PABPC1P11940 636 aaKnown RBP5.77□□□□□ -1.49
SKP1-205ENST00000519054 LCP1P13796 627 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 FPR2P25090 351 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 LTBRP36941 435 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 BCL6P41182 706 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 CDR1P51861 262 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 NCKAP1LP55160 1127 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 RPL11P62913 178 aaKnown RBP5.77□□□□□ -1.49
SKP1-205ENST00000519054 MAP4K2Q12851 820 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 KCNA10Q16322 511 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 YOD1Q5VVQ6 348 aaPredicted RBP5.77□□□□□ -1.49
SKP1-205ENST00000519054 WWC2Q6AWC2 1192 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 USP53Q70EK8 1073 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 RCBTB1Q8NDN9 531 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 PLEKHO2Q8TD55 490 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 SPATA9Q9BWV2 254 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 FBXL7Q9UJT9 491 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 PCDHA2Q9Y5H9 948 aa5.77□□□□□ -1.49
SKP1-205ENST00000519054 TRAV20A0A0B4J274 112 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 FAM221BA6H8Z2 402 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 DIAPH1O60610 1272 aaKnown RBP5.76□□□□□ -1.49
SKP1-205ENST00000519054 FGFR1P11362 822 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 LINC00310P59036 64 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 SSRP1Q08945 709 aaKnown RBP5.76□□□□□ -1.49
SKP1-205ENST00000519054 RASA3Q14644 834 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 CEP68Q76N32 757 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 LDHDQ86WU2 507 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 CILP2Q8IUL8 1156 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 MZB1Q8WU39 189 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 ZNF669Q96BR6 464 aaPredicted RBP5.76□□□□□ -1.49
SKP1-205ENST00000519054 CHAMP1Q96JM3 812 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 DEPDC7Q96QD5 511 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 BCAS3Q9H6U6 928 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 SNTG2Q9NY99 539 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 SIT1Q9Y3P8 196 aa5.76□□□□□ -1.49
SKP1-205ENST00000519054 BLACEA4D250 179 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 N4BP3O15049 544 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 ADCY3O60266 1144 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 JAG1P78504 1218 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 IFRD2Q12894 506 aaPredicted RBP5.75□□□□□ -1.49
SKP1-205ENST00000519054 SSPNQ14714 243 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 TESK1Q15569 626 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 SOGA3Q5TF21 947 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 NLRP10Q86W26 655 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 NETO2Q8NC67 525 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 OSBP2Q969R2 916 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
SKP1-205ENST00000519054 TOX2Q96NM4 488 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 SRPK1Q96SB4 655 aaKnown RBP5.75□□□□□ -1.49
SKP1-205ENST00000519054 NUDT5Q9UKK9 219 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 CNOT6Q9ULM6 557 aaKnown RBP5.75□□□□□ -1.49
SKP1-205ENST00000519054 IRAK3Q9Y616 596 aa5.75□□□□□ -1.49
SKP1-205ENST00000519054 CFPP27918 469 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 GTF2A2P52657 109 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 RBM10P98175 930 aaKnown RBP5.74□□□□□ -1.49
SKP1-205ENST00000519054 NTRK3Q16288 839 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 IGDCC3Q8IVU1 814 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 LRRC56Q8IYG6 542 aaPredicted RBP5.74□□□□□ -1.49
SKP1-205ENST00000519054 ALG3Q92685 438 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 PEX11GQ96HA9 241 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 TMEM169Q96HH4 297 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 SIGLEC10Q96LC7 697 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 PHF20Q9BVI0 1012 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 KCTD3Q9Y597 815 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 PCDHA5Q9Y5H7 936 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 NPFFR2Q9Y5X5 522 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 KDM2BQ8NHM5 1336 aa5.74□□□□□ -1.49
SKP1-205ENST00000519054 NUAK1O60285 661 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 BUB1BO60566 1050 aaPredicted RBP5.73□□□□□ -1.49
SKP1-205ENST00000519054 MSCO60682 206 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 PI3P19957 117 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 LSAMPQ13449 338 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 CIAPIN1Q6FI81 312 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 KCNT2Q6UVM3 1135 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 DCP2Q8IU60 420 aaKnown RBP5.73□□□□□ -1.49
SKP1-205ENST00000519054 ZBTB38Q8NAP3 1195 aaPredicted RBP5.73□□□□□ -1.49
SKP1-205ENST00000519054 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 TSPAN17Q96FV3 270 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 DRC1Q96MC2 740 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 DNAJC7Q99615 494 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 CDC6Q99741 560 aa5.73□□□□□ -1.49
SKP1-205ENST00000519054 IRF2BPLQ9H1B7 796 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms