RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	EHMT1	Q9H9B1	1298 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	FLRT1	Q9NZU1	646 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	BIN2	Q9UBW5	565 aa	Predicted RBP	27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	SYNGAP1	Q96PV0	1343 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	MCTP2	Q6DN12	878 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	INTS4	Q96HW7	963 aa	Known RBP	27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	C8orf76	Q96K31	380 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	PHF20	Q9BVI0	1012 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	MCOLN1	Q9GZU1	580 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	BRMS1	Q9HCU9	246 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	PXMP2	Q9NR77	195 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	PCDHA4	Q9UN74	947 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	KCNJ14	Q9UNX9	436 aa		27.79	■■■□□ 2.04
PCM1-209	ENST00000518930	ASTN1	O14525	1302 aa		27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	EIF2AK2	P19525	551 aa	Known RBP	27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	AP3B2	Q13367	1082 aa		27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	MAMDC4	Q6UXC1	1216 aa		27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	DAGLB	Q8NCG7	672 aa		27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	MCM3AP	O60318	1980 aa		27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	LRRC37A2	A6NM11	1700 aa		27.78	■■■□□ 2.04
PCM1-209	ENST00000518930	FOS	P01100	380 aa	Predicted RBP	27.77	■■■□□ 2.04
PCM1-209	ENST00000518930	ARMCX2	Q7L311	632 aa		27.77	■■■□□ 2.04
PCM1-209	ENST00000518930	BLID	Q8IZY5	108 aa		27.77	■■■□□ 2.04
PCM1-209	ENST00000518930	SH3TC2	Q8TF17	1288 aa		27.77	■■■□□ 2.04
PCM1-209	ENST00000518930	GJB4	Q9NTQ9	266 aa		27.77	■■■□□ 2.04
PCM1-209	ENST00000518930	INHA	P05111	366 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	CYP2C19	P33261	490 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	CLK2	P49760	499 aa	Known RBP	27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	UBXN2A	P68543	259 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	PDE4D	Q08499	809 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	IWS1	Q96ST2	819 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	FOXD4L1	Q9NU39	408 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	PCDHA6	Q9UN73	950 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	CNPY2	Q9Y2B0	182 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	PCDHA8	Q9Y5H6	950 aa		27.76	■■■□□ 2.03
PCM1-209	ENST00000518930	FRMPD4	Q14CM0	1322 aa		27.75	■■■□□ 2.03
PCM1-209	ENST00000518930	SAFB	Q15424	915 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
PCM1-209	ENST00000518930	JAKMIP3	Q5VZ66	844 aa		27.75	■■■□□ 2.03
PCM1-209	ENST00000518930	KRT40	Q6A162	431 aa		27.75	■■■□□ 2.03
PCM1-209	ENST00000518930	TMEM260	Q9NX78	707 aa		27.75	■■■□□ 2.03
PCM1-209	ENST00000518930	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.75	■■■□□ 2.03
PCM1-209	ENST00000518930	HTT	P42858	3142 aa		27.74	■■■□□ 2.03
PCM1-209	ENST00000518930	MMP1	P03956	469 aa		27.74	■■■□□ 2.03
PCM1-209	ENST00000518930	KRT2	P35908	639 aa		27.74	■■■□□ 2.03
PCM1-209	ENST00000518930	PDCD2L	Q9BRP1	358 aa		27.74	■■■□□ 2.03
PCM1-209	ENST00000518930	ANO3	Q9BYT9	981 aa		27.74	■■■□□ 2.03
PCM1-209	ENST00000518930	RPTOR	Q8N122	1335 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	PRKAR2A	P13861	404 aa	Known RBP	27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	EDNRB	P24530	442 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	CCND2	P30279	289 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	GUCY1B3	Q02153	619 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	PGM5	Q15124	567 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	RASGRP4	Q8TDF6	673 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	MORC4	Q8TE76	937 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	PGBD1	Q96JS3	809 aa		27.73	■■■□□ 2.03
PCM1-209	ENST00000518930	IGHA2	P01877	340 aa		27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	NR3C2	P08235	984 aa		27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	TRIM32	Q13049	653 aa		27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	NPY5R	Q15761	445 aa		27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	FBXO18	Q8NFZ0	1043 aa		27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	NRBP1	Q9UHY1	535 aa		27.72	■■■□□ 2.03
PCM1-209	ENST00000518930	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.72	■■■□□ 2.03
PCM1-209	ENST00000518930		H3BQV1	296 aa		27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	MYCL	P12524	364 aa	Predicted RBP	27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	ANP32A	P39687	249 aa	Known RBP	27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	CACNB2	Q08289	660 aa	Predicted RBP	27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	STXBP2	Q15833	593 aa		27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	IFFO2	Q5TF58	517 aa		27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	ABHD16B	Q9H3Z7	469 aa		27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	DDX49	Q9Y6V7	483 aa	Known RBP	27.71	■■■□□ 2.03
PCM1-209	ENST00000518930	ADAMTS3	O15072	1205 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	SNAI1	O95863	264 aa	Predicted RBP	27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	PDC	P20941	246 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	EEPD1	Q7L9B9	569 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	KRT25	Q7Z3Z0	450 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	DIS3L2	Q8IYB7	885 aa	Known RBP	27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	IL31RA	Q8NI17	732 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	ARMC5	Q96C12	935 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	VTA1	Q9NP79	307 aa		27.7	■■■□□ 2.02
PCM1-209	ENST00000518930	CCDC194	A0A1B0GVG4	234 aa		27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	CYBA	P13498	195 aa		27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	ACVR2B	Q13705	512 aa		27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	GNL2	Q13823	731 aa	Known RBP	27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	MAP3K21	Q5TCX8	1036 aa		27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	PCNX4	Q63HM2	1172 aa		27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	LARP1B	Q659C4	914 aa	Known RBP	27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	XRRA1	Q6P2D8	792 aa		27.69	■■■□□ 2.02
PCM1-209	ENST00000518930	FBXO16	Q8IX29	292 aa	Predicted RBP	27.69	■■■□□ 2.02
PCM1-209	ENST00000518930		M0R2N6	131 aa		27.68	■■■□□ 2.02
PCM1-209	ENST00000518930	SREBF1	P36956	1147 aa		27.68	■■■□□ 2.02
PCM1-209	ENST00000518930	PRAMEF19	Q5SWL8	479 aa		27.68	■■■□□ 2.02
PCM1-209	ENST00000518930	OXER1	Q8TDS5	423 aa		27.68	■■■□□ 2.02
PCM1-209	ENST00000518930	ZNF333	Q96JL9	665 aa		27.68	■■■□□ 2.02
PCM1-209	ENST00000518930	HMX1	Q9NP08	348 aa	Predicted RBP	27.68	■■■□□ 2.02
PCM1-209	ENST00000518930	MYH7B	A7E2Y1	1941 aa		27.67	■■■□□ 2.02
PCM1-209	ENST00000518930	KIAA1217	Q5T5P2	1943 aa		27.67	■■■□□ 2.02
PCM1-209	ENST00000518930	EIF3J	O75822	258 aa	Known RBP	27.67	■■■□□ 2.02
PCM1-209	ENST00000518930	STAM2	O75886	525 aa		27.67	■■■□□ 2.02
PCM1-209	ENST00000518930	CNGA1	P29973	690 aa		27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms