RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CLTB	P09497	229 aa		27.99	■■■□□ 2.07
CNOT7-204	ENST00000518885	HSD17B4	P51659	736 aa		27.99	■■■□□ 2.07
CNOT7-204	ENST00000518885	TTLL4	Q14679	1199 aa		27.99	■■■□□ 2.07
CNOT7-204	ENST00000518885	DHX32	Q7L7V1	743 aa	Known RBP	27.99	■■■□□ 2.07
CNOT7-204	ENST00000518885	SGMS1	Q86VZ5	419 aa		27.99	■■■□□ 2.07
CNOT7-204	ENST00000518885	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.98	■■■□□ 2.07
CNOT7-204	ENST00000518885	PQBP1	O60828	265 aa	Known RBP	27.98	■■■□□ 2.07
CNOT7-204	ENST00000518885	POLR2M	P0CAP2	368 aa		27.98	■■■□□ 2.07
CNOT7-204	ENST00000518885	ANKRD33	Q7Z3H0	272 aa		27.98	■■■□□ 2.07
CNOT7-204	ENST00000518885	TAAR1	Q96RJ0	339 aa		27.98	■■■□□ 2.07
CNOT7-204	ENST00000518885	DDX49	Q9Y6V7	483 aa	Known RBP	27.98	■■■□□ 2.07
CNOT7-204	ENST00000518885	CYTH3	O43739	400 aa		27.97	■■■□□ 2.07
CNOT7-204	ENST00000518885	FGD1	P98174	961 aa		27.97	■■■□□ 2.07
CNOT7-204	ENST00000518885	MYL10	Q9BUA6	226 aa		27.97	■■■□□ 2.07
CNOT7-204	ENST00000518885	PDLIM7	Q9NR12	457 aa		27.97	■■■□□ 2.07
CNOT7-204	ENST00000518885	POLR3E	Q9NVU0	708 aa		27.97	■■■□□ 2.07
CNOT7-204	ENST00000518885	TLR3	O15455	904 aa	Known RBP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	EPB41L2	O43491	1005 aa	Known RBP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	PPP1R11	O60927	126 aa	Predicted RBP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	EIF3J	O75822	258 aa	Known RBP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	FXR1	P51114	621 aa	Known RBP eCLIP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	MDM2	Q00987	491 aa	Predicted RBP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	BEX3	Q00994	111 aa		27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	TDH	Q8IZJ6	230 aa		27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	OR6J1	Q8NGC5	347 aa		27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	TBC1D5	Q92609	795 aa		27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	GPHN	Q9NQX3	736 aa	Predicted RBP	27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	PXMP2	Q9NR77	195 aa		27.96	■■■□□ 2.07
CNOT7-204	ENST00000518885	RANBP2	P49792	3224 aa	Known RBP	27.95	■■■□□ 2.07
CNOT7-204	ENST00000518885	CTAGE5	O15320	804 aa		27.95	■■■□□ 2.06
CNOT7-204	ENST00000518885	TXN	P10599	105 aa	Known RBP	27.95	■■■□□ 2.06
CNOT7-204	ENST00000518885	FANCB	Q8NB91	859 aa		27.95	■■■□□ 2.06
CNOT7-204	ENST00000518885	TMEM39A	Q9NV64	488 aa		27.95	■■■□□ 2.06
CNOT7-204	ENST00000518885	RBM28	Q9NW13	759 aa	Known RBP	27.95	■■■□□ 2.06
CNOT7-204	ENST00000518885	ARVCF	O00192	962 aa		27.94	■■■□□ 2.06
CNOT7-204	ENST00000518885	KPNA6	O60684	536 aa		27.94	■■■□□ 2.06
CNOT7-204	ENST00000518885	EIF2AK2	P19525	551 aa	Known RBP	27.94	■■■□□ 2.06
CNOT7-204	ENST00000518885	CUL5	Q93034	780 aa		27.94	■■■□□ 2.06
CNOT7-204	ENST00000518885	LRRC2	Q9BYS8	371 aa		27.94	■■■□□ 2.06
CNOT7-204	ENST00000518885	COL20A1	Q9P218	1284 aa		27.94	■■■□□ 2.06
CNOT7-204	ENST00000518885	OPLAH	O14841	1288 aa		27.93	■■■□□ 2.06
CNOT7-204	ENST00000518885	NR3C2	P08235	984 aa		27.93	■■■□□ 2.06
CNOT7-204	ENST00000518885	CXCL17	Q6UXB2	119 aa		27.93	■■■□□ 2.06
CNOT7-204	ENST00000518885	MICU3	Q86XE3	530 aa		27.93	■■■□□ 2.06
CNOT7-204	ENST00000518885	PIBF1	Q8WXW3	757 aa		27.93	■■■□□ 2.06
CNOT7-204	ENST00000518885	KIAA0355	O15063	1070 aa		27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	RAG1	P15918	1043 aa		27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	HSPA4	P34932	840 aa		27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	IRX5	P78411	483 aa	Predicted RBP	27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	EXOSC10	Q01780	885 aa	Known RBP	27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	SLC35G1	Q2M3R5	365 aa		27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	KCNV1	Q6PIU1	500 aa		27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	RASEF	Q8IZ41	740 aa		27.92	■■■□□ 2.06
CNOT7-204	ENST00000518885	ZBTB43	O43298	467 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	PSMA5	P28066	241 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	CDK7	P50613	346 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	RCAN1	P53805	252 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	APOA5	Q6Q788	366 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	SEPT14	Q6ZU15	432 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	KCNB2	Q92953	911 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	TRIOBP	Q9H2D6	2365 aa		27.91	■■■□□ 2.06
CNOT7-204	ENST00000518885	PLEKHA8P1	O95397	391 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	RXRA	P19793	462 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	CCND2	P30279	289 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	HOXA13	P31271	388 aa	Predicted RBP	27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	FAAP100	Q0VG06	881 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	ITGA7	Q13683	1181 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	ADCK5	Q3MIX3	580 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	BLOC1S2	Q6QNY1	142 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	TMTC3	Q6ZXV5	915 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	SRBD1	Q8N5C6	995 aa	Known RBP	27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	PDCD2L	Q9BRP1	358 aa		27.9	■■■□□ 2.06
CNOT7-204	ENST00000518885	GH1	P01241	217 aa		27.89	■■■□□ 2.06
CNOT7-204	ENST00000518885	SMARCC2	Q8TAQ2	1214 aa		27.89	■■■□□ 2.06
CNOT7-204	ENST00000518885	JAKMIP1	Q96N16	626 aa	Known RBP	27.89	■■■□□ 2.06
CNOT7-204	ENST00000518885	MTG1	Q9BT17	334 aa	Predicted RBP	27.89	■■■□□ 2.06
CNOT7-204	ENST00000518885	MRVI1	Q9Y6F6	885 aa		27.89	■■■□□ 2.06
CNOT7-204	ENST00000518885	TRIM43B	A6NCK2	446 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885		A6NJR5	290 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	STAM2	O75886	525 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	MYL3	P08590	195 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	MYCL	P12524	364 aa	Predicted RBP	27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	RTN1	Q16799	776 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	LRIT3	Q3SXY7	679 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	TMEM63B	Q5T3F8	832 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	FCHSD1	Q86WN1	690 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	BAD	Q92934	168 aa		27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	TRIM43	Q96BQ3	446 aa	Predicted RBP	27.88	■■■□□ 2.05
CNOT7-204	ENST00000518885	CCDC196	A0A1B0GTZ2	297 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	EIF5B	O60841	1220 aa	Known RBP	27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	PGM5	Q15124	567 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	GNPTAB	Q3T906	1256 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	CCDC62	Q6P9F0	684 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	SH3RF1	Q7Z6J0	888 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	VSIG10L	Q86VR7	867 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	SLC43A3	Q8NBI5	491 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	SNX14	Q9Y5W7	946 aa		27.87	■■■□□ 2.05
CNOT7-204	ENST00000518885	KLF18	A0A0U1RQI7	1052 aa		27.86	■■■□□ 2.05
CNOT7-204	ENST00000518885	TGFB3	P10600	412 aa		27.86	■■■□□ 2.05
CNOT7-204	ENST00000518885	PURA	Q00577	322 aa	Known RBP	27.86	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms