RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TBCKQ8TEA7 893 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 SPZ1Q9BXG8 430 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 TSGA10Q9BZW7 698 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 BLOC1S4Q9NUP1 217 aa18.43■□□□□ 0.54
PCDHGA11-202ENST00000518882 SNED1Q8TER0 1413 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 MYMKA6NI61 221 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 ERCC3P19447 782 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 GRB10Q13322 594 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 VWA3BQ502W6 1294 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 COBLL1Q53SF7 1204 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 TMED8Q6PL24 325 aaPredicted RBP18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 MAPKAPK5Q8IW41 473 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 FNBP4Q8N3X1 1017 aaPredicted RBP18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 TRIM58Q8NG06 486 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 AENQ8WTP8 325 aaKnown RBP18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 LRRC1Q9BTT6 524 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 SMARCAL1Q9NZC9 954 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 DMGDHQ9UI17 866 aaKnown RBP18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 COL24A1Q17RW2 1714 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 TM4SF1P30408 202 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 EIF4A3P38919 411 aaKnown RBP18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 GOLGA6L1Q8N7Z2 621 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 PSMB7Q99436 277 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 CRACR2AQ9BSW2 395 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 TMEM260Q9NX78 707 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 EHD2Q9NZN4 543 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 RSPH14Q9UHP6 348 aa18.42■□□□□ 0.54
PCDHGA11-202ENST00000518882 CXCR5P32302 372 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 PPP1R2P41236 205 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 TXKP42681 527 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 AMPD3Q01432 767 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 MMGT1Q8N4V1 131 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 RRP36Q96EU6 259 aaKnown RBP18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 VAT1LQ9HCJ6 419 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 SALL4Q9UJQ4 1053 aa18.41■□□□□ 0.54
PCDHGA11-202ENST00000518882 TACC1O75410 805 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 DYMQ7RTS9 669 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 ZNF572Q7Z3I7 529 aaPredicted RBP18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 SPATA4Q8NEY3 305 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 PNMA5Q96PV4 448 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 MMRN2Q9H8L6 949 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 FAM184BQ9ULE4 1060 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 THRAP3Q9Y2W1 955 aaKnown RBP18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 LRRC53A6NM62 1247 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 ANKRD65E5RJM6 399 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 USO1O60763 962 aaKnown RBP18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 LCA5LO95447 670 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 IQCEQ6IPM2 695 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 GLIS3Q8NEA6 775 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 CALML4Q96GE6 196 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 PIGSQ96S52 555 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 OSBPL9Q96SU4 736 aa18.4■□□□□ 0.54
PCDHGA11-202ENST00000518882 GNA11P29992 359 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 NT5C2P49902 561 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 SLC7A5Q01650 507 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 SV2BQ7L1I2 683 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 RRAGAQ7L523 313 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 BAP1Q92560 729 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 MTMR9Q96QG7 549 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 SETDB2Q96T68 719 aa18.39■□□□□ 0.54
PCDHGA11-202ENST00000518882 GOLGA6BA6NDN3 693 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 NCK2O43639 380 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 EDIL3O43854 480 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 UNC13DQ70J99 1090 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 CCDC155Q8N6L0 562 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 GPR101Q96P66 508 aaPredicted RBP18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 EYA3Q99504 573 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 NYXQ9GZU5 481 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 DEF6Q9H4E7 631 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 ZNF831Q5JPB2 1677 aa18.39■□□□□ 0.53
PCDHGA11-202ENST00000518882 SLC37A4O43826 429 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 CDK8P49336 464 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 PPP4CP60510 307 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 SND1Q7KZF4 910 aaKnown RBP eCLIP18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 WDR66Q8TBY9 1149 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 AKR1B10O60218 316 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 PPFIA4O75335 1185 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 BAG3O95817 575 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 PRLRP16471 622 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 ITIH3Q06033 890 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 LRRC55Q6ZSA7 311 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 REXO1Q8N1G1 1221 aaKnown RBP18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 IQCDQ96DY2 449 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 NUDT12Q9BQG2 462 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
PCDHGA11-202ENST00000518882 POTEMA6NI47 508 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms