RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SYF2O95926 243 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 CDK17Q00537 523 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 ATP2B2Q01814 1243 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 GABPAQ06546 454 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 REXO1Q8N1G1 1221 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 EXOC4Q96A65 974 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 VPS18Q9P253 973 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 PLAGL2Q9UPG8 496 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 LTBP1Q14766 1721 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 IGKV6D-41A0A0C4DH26 115 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 ESYT2A0FGR8 921 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 MACROD2A1Z1Q3 448 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 CCDC66A2RUB6 948 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 TULP2O00295 520 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 UFL1O94874 794 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 SNHG28P0DPA3 235 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 CAPN2P17655 700 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 SMARCA1P28370 1054 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 GNA11P29992 359 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 MTIF2P46199 727 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.93e-10■■■■■ 41
CTNNA1-210ENST00000518825 EIF6P56537 245 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 TAF3Q5VWG9 929 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 CREG2Q8IUH2 290 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 GSPT2Q8IYD1 628 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 CCDC170Q8IYT3 715 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 LRRC47Q8N1G4 583 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 BAP1Q92560 729 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 HAS1Q92839 578 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 DDX4Q9NQI0 724 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 MTMR4Q9NYA4 1195 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 PSD3Q9NYI0 1048 aa9.43□□□□□ -0.9
CTNNA1-210ENST00000518825 BICDL2A1A5D9 508 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 AKR1B1P15121 316 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 KRT83P78385 493 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 LRRC41Q15345 812 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 VWA3BQ502W6 1294 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 CNBD1Q8NA66 436 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 HDAC7Q8WUI4 952 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 C8orf37Q96NL8 207 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 NUP58Q9BVL2 599 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 NDST4Q9H3R1 872 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 MLXIPQ9HAP2 919 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 FAM207AQ9NSI2 230 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 LCA5LO95447 670 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 RFC4P35249 363 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 CLK2P49760 499 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 TUBB4BP68371 445 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 UBE2SQ16763 222 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 AMOTL1Q8IY63 956 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 CERKQ8TCT0 537 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 COG1Q8WTW3 980 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 GDAP1L1Q96MZ0 367 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 PHACTR2O75167 634 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 LDHCP07864 332 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 VAV2P52735 878 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 APBA1Q02410 837 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 CALCRLQ16602 461 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 ASTE1Q2TB18 679 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 TMEM119Q4V9L6 283 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 TTBK2Q6IQ55 1244 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 UNC13DQ70J99 1090 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 KIAA1328Q86T90 577 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 LARP4BQ92615 738 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 RAD54LQ92698 747 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 DNAJC19Q96DA6 116 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 JMJD4Q9H9V9 463 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 SMARCAL1Q9NZC9 954 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 DAGLAQ9Y4D2 1042 aa9.42□□□□□ -0.9
CTNNA1-210ENST00000518825 PLIN4Q96Q06 1357 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 THSD7AQ9UPZ6 1657 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 KRT86O43790 486 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 ERLIN1O75477 346 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 PRPF6O94906 941 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 LMAN1P49257 510 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 C2orf54Q08AI8 447 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 TRAPPC3LQ5T215 181 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 HGSNATQ68CP4 663 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 SV2BQ7L1I2 683 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 TXLNBQ8N3L3 684 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 RIN2Q8WYP3 895 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 DDX12PQ92771 950 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 UIMC1Q96RL1 719 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 EHD2Q9NZN4 543 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 SEC63Q9UGP8 760 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 MYH7BA7E2Y1 1941 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 LRRC53A6NM62 1247 aa9.41□□□□□ -0.9
CTNNA1-210ENST00000518825 AGPSO00116 658 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms