RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
PCM1-203ENST00000517545 FGRP09769 529 aa13.71□□□□□ -0.21
PCM1-203ENST00000517545 CALML3P27482 149 aa13.71□□□□□ -0.21
PCM1-203ENST00000517545 SLC1A4P43007 532 aa13.71□□□□□ -0.21
PCM1-203ENST00000517545 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.21
PCM1-203ENST00000517545 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.21
PCM1-203ENST00000517545 TXNRD1Q16881 649 aa13.71□□□□□ -0.21
PCM1-203ENST00000517545 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
PCM1-203ENST00000517545 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
PCM1-203ENST00000517545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
PCM1-203ENST00000517545 COL1A1P02452 1464 aaPredicted RBP13.71□□□□□ -0.22
PCM1-203ENST00000517545 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.22
PCM1-203ENST00000517545 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.22
PCM1-203ENST00000517545 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.22
PCM1-203ENST00000517545 PCDHA6Q9UN73 950 aa13.71□□□□□ -0.22
PCM1-203ENST00000517545 PCDHA8Q9Y5H6 950 aa13.71□□□□□ -0.22
PCM1-203ENST00000517545 TOGARAM1Q9Y4F4 1720 aa13.71□□□□□ -0.22
PCM1-203ENST00000517545 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 TNFRSF8P28908 595 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 RCSD1Q6JBY9 416 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 KDM7AQ6ZMT4 941 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 CABP7Q86V35 215 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 ZNF473Q8WTR7 871 aaKnown RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 JPH2Q9BR39 696 aaPredicted RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 EPN3Q9H201 632 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 M0R2N6 131 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 LCA5LO95447 670 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 MYL1P05976 194 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 NR1D1P20393 614 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 MAP2K2P36507 400 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 HDLBPQ00341 1268 aaKnown RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 CABS1Q96KC9 395 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 CXorf56Q9H5V9 222 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 GDF3Q9NR23 364 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 FSBPO95073 299 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
PCM1-203ENST00000517545 PACSIN2Q9UNF0 486 aaPredicted RBP13.7□□□□□ -0.22
PCM1-203ENST00000517545 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
PCM1-203ENST00000517545 FTCDO95954 541 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 USP8P40818 1118 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 PTGISQ16647 500 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 BAP1Q92560 729 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 PPP1R37O75864 691 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 CFAP221Q4G0U5 840 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 CCT8L2Q96SF2 557 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 KRT12Q99456 494 aa13.69□□□□□ -0.22
PCM1-203ENST00000517545 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 NOX5Q96PH1 765 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
PCM1-203ENST00000517545 IFT88Q13099 833 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 ASTE1Q2TB18 679 aaPredicted RBP13.68□□□□□ -0.22
PCM1-203ENST00000517545 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 SHANK3Q9BYB0 1731 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 ATXN2Q99700 1313 aaKnown RBP13.68□□□□□ -0.22
PCM1-203ENST00000517545 PAK2Q13177 524 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 NLRP14Q86W24 1093 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
PCM1-203ENST00000517545 A6NNZ2 444 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 PJA2O43164 708 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 ORC4O43929 436 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 PALMO75781 387 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 TUBB8Q3ZCM7 444 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 GLE1Q53GS7 698 aaKnown RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 BRINP3Q76B58 766 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CCDC47Q96A33 483 aaKnown RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 C7orf25Q9BPX7 421 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CENPHQ9H3R5 247 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 TCP11L1Q9NUJ3 509 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 ERVV-1B6SEH8 477 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 COL4A1P02462 1669 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 KIF5BP33176 963 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 TECP42680 631 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 NUP98P52948 1817 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CENPPQ6IPU0 288 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 ZNF804BA4D1E1 1349 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 E7EVH7 732 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CYTH3O43739 400 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 MDH1P40925 334 aaKnown RBP13.67□□□□□ -0.22
PCM1-203ENST00000517545 LETM2Q2VYF4 491 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CEP85LQ5SZL2 805 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 ATP6V1G3Q96LB4 118 aa13.67□□□□□ -0.22
PCM1-203ENST00000517545 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms