RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 RPL13P26373 211 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 GIPRP48546 466 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 GRB10Q13322 594 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 SMAD4Q13485 552 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 DPY19L1Q2PZI1 675 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 GNPTABQ3T906 1256 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 PRR31Q5SQ13 230 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 FBXW10Q5XX13 1052 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 HEATR6Q6AI08 1181 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 WWC2Q6AWC2 1192 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 TTLL7Q6ZT98 887 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 C19orf47Q8N9M1 422 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 KYQ8NBH2 561 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 RNF34Q969K3 372 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 FGD4Q96M96 766 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 C11orf84Q9BUA3 381 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 PHAXQ9H814 394 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 METTL5Q9NRN9 209 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 GINM1Q9NU53 330 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 DDX41Q9UJV9 622 aaKnown RBP2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 PCDHB10Q9UN67 800 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 PCDHGB7Q9Y5F8 929 aa2.78□□□□□ -1.96
RNU6-1299P-201ENST00000516316 NPHP3-ACAD11A0A0J9YXS1 232 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SGSM2O43147 1006 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 NPHS1O60500 1241 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 PPM1BO75688 479 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 FUCA1P04066 466 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CYP2C8P10632 490 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 ZNF16P17020 682 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SOX9P48436 509 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SEPHS1P49903 392 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 AMPD2Q01433 879 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SLC7A5Q01650 507 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CYP4F3Q08477 520 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 COL9A2Q14055 689 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 RGL3Q3MIN7 710 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 FAM26FQ5R3K3 315 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MBLAC2Q68D91 279 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CCDC81Q6ZN84 652 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MIB1Q86YT6 1006 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 FAM26EQ8N5C1 309 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 COPS5Q92905 334 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 C8orf49Q96NF6 230 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MMP19Q99542 508 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 GBP3Q9H0R5 595 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 PCDH18Q9HCL0 1135 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 INVSQ9Y283 1065 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SLC12A7Q9Y666 1083 aa2.77□□□□□ -1.97
RNU6-1299P-201ENST00000516316 TRBV23OR9-2A0A075B6M9 112 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MROH6A6NGR9 719 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 ARNTLO00327 626 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SMARCA5O60264 1052 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 PLS3P13797 630 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 EIF6P56537 245 aaKnown RBP2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 KIAA2012Q0VF49 1180 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CDSNQ15517 529 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 C9orf131Q5VYM1 1079 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 ADAT2Q7Z6V5 191 aaKnown RBP2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 LGI4Q8N135 537 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 TXNDC5Q8NBS9 432 aaKnown RBP2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SLC16A11Q8NCK7 471 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 LOXL4Q96JB6 756 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CLEC1BQ9P126 229 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 APEX2Q9UBZ4 518 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 EMC9Q9Y3B6 208 aa2.76□□□□□ -1.97
RNU6-1299P-201ENST00000516316 DDX3XO00571 662 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SLC6A11P48066 632 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CASP7P55210 303 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 ITGA1P56199 1179 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 PAK2Q13177 524 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 INF2Q27J81 1249 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CR1LQ2VPA4 569 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MCTP2Q6DN12 878 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 ETV3LQ6ZN32 361 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 LIMS2Q7Z4I7 341 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 STK32CQ86UX6 486 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 METTL16Q86W50 562 aaKnown RBP2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 DCP2Q8IU60 420 aaKnown RBP2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 FAM126BQ8IXS8 530 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 Q8N1X5 172 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 Q8N1Y9 231 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 TTLL6Q8N841 843 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 OR6P1Q8NGX9 317 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 RASGRP4Q8TDF6 673 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 USP33Q8TEY7 942 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SEC14L1Q92503 715 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 DVL3Q92997 716 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MBD6Q96DN6 1003 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SHDQ96IW2 340 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 CRBNQ96SW2 442 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 GPRC5CQ9NQ84 441 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 MARCH2Q9P0N8 246 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 EFR3BQ9Y2G0 817 aa2.75□□□□□ -1.97
RNU6-1299P-201ENST00000516316 ANKRD34BA5PLL1 514 aa2.74□□□□□ -1.97
RNU6-1299P-201ENST00000516316 C9orf118A6NHY6 69 aa2.74□□□□□ -1.97
RNU6-1299P-201ENST00000516316 C22orf46C9J442 243 aa2.74□□□□□ -1.97
RNU6-1299P-201ENST00000516316 SUV39H1O43463 412 aa2.74□□□□□ -1.97
RNU6-1299P-201ENST00000516316 B4GALT3O60512 393 aa2.74□□□□□ -1.97
RNU6-1299P-201ENST00000516316 FSHBP01225 129 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms