RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 ARPP21Q9UBL0 812 aaPredicted RBP14.36□□□□□ -0.11
PHF3-212ENST00000515594 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 IVLP07476 585 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 SLC1A4P43007 532 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 ATP1A2P50993 1020 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 DDB1Q16531 1140 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 AMIGO3Q86WK7 504 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 PIGSQ96S52 555 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 ACBD3Q9H3P7 528 aa14.36□□□□□ -0.11
PHF3-212ENST00000515594 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
PHF3-212ENST00000515594 SLC37A4O43826 429 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 TDP2O95551 362 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 KRT14P02533 472 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 RPS8P62241 208 aaKnown RBP14.35□□□□□ -0.11
PHF3-212ENST00000515594 GRM4Q14833 912 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 LINC00116Q8NCU8 138 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 COA7Q96BR5 231 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 OSBPL9Q96SU4 736 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 TDRD12Q587J7 1177 aaKnown RBP14.35□□□□□ -0.11
PHF3-212ENST00000515594 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 FTCDO95954 541 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 FAM153BP0C7A2 387 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 FAM153CQ494X1 144 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 MAP9Q49MG5 647 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 PURBQ96QR8 312 aaKnown RBP14.35□□□□□ -0.11
PHF3-212ENST00000515594 NDST4Q9H3R1 872 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
PHF3-212ENST00000515594 LIG3P49916 1009 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 CKAP4Q07065 602 aaKnown RBP14.34□□□□□ -0.11
PHF3-212ENST00000515594 SLC20A2Q08357 652 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 AENQ8WTP8 325 aaKnown RBP14.34□□□□□ -0.11
PHF3-212ENST00000515594 DHTKD1Q96HY7 919 aaPredicted RBP14.34□□□□□ -0.11
PHF3-212ENST00000515594 BLOC1S4Q9NUP1 217 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 SIK3Q9Y2K2 1263 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 GUCY2FP51841 1108 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 GRB10Q13322 594 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 PDCLQ13371 301 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 FAM182BQ5T319 152 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 TMED8Q6PL24 325 aaPredicted RBP14.34□□□□□ -0.11
PHF3-212ENST00000515594 ZNF444Q8N0Y2 327 aaPredicted RBP14.34□□□□□ -0.11
PHF3-212ENST00000515594 FAM76AQ8TAV0 307 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 IFT81Q8WYA0 676 aa14.34□□□□□ -0.11
PHF3-212ENST00000515594 PYM1Q9BRP8 204 aaKnown RBP14.34□□□□□ -0.11
PHF3-212ENST00000515594 CASZ1Q86V15 1759 aa14.33□□□□□ -0.11
PHF3-212ENST00000515594 SSBP05455 408 aaKnown RBP eCLIP14.33□□□□□ -0.11
PHF3-212ENST00000515594 IRAK1P51617 712 aa14.33□□□□□ -0.11
PHF3-212ENST00000515594 NFIXQ14938 502 aa14.33□□□□□ -0.11
PHF3-212ENST00000515594 ECM1Q16610 540 aa14.33□□□□□ -0.11
PHF3-212ENST00000515594 TTMPQ5BVD1 217 aa14.33□□□□□ -0.11
PHF3-212ENST00000515594 HAUS3Q68CZ6 603 aa14.33□□□□□ -0.11
PHF3-212ENST00000515594 RASA1P20936 1047 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 GNGT1P63211 74 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 VWA3BQ502W6 1294 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 CCDC181Q5TID7 509 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 NELFCDQ8IXH7 590 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 VIPAS39Q9H9C1 493 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 PLAGL2Q9UPG8 496 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 LAMB1P07942 1786 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 PPFIA4O75335 1185 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 GLI1P08151 1106 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 MAGEA1P43355 309 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 NOP2P46087 812 aaKnown RBP14.33□□□□□ -0.12
PHF3-212ENST00000515594 CARSP49589 748 aaKnown RBP14.33□□□□□ -0.12
PHF3-212ENST00000515594 NONOQ15233 471 aaKnown RBP eCLIP14.33□□□□□ -0.12
PHF3-212ENST00000515594 SF3B3Q15393 1217 aaKnown RBP14.33□□□□□ -0.12
PHF3-212ENST00000515594 BCAS4Q8TDM0 211 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 PACSIN1Q9BY11 444 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 MKRN1Q9UHC7 482 aaKnown RBP14.33□□□□□ -0.12
PHF3-212ENST00000515594 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 UTRNP46939 3433 aa14.33□□□□□ -0.12
PHF3-212ENST00000515594 USP17L5A8MUK1 530 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 TACC1O75410 805 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 RPS6KA5O75582 802 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 UBE2SQ16763 222 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 DGKHQ86XP1 1220 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 CCDC170Q8IYT3 715 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 EHBP1Q8NDI1 1231 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 TLR10Q9BXR5 811 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 NFU1Q9UMS0 254 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 TARSL2A2RTX5 802 aaKnown RBP14.32□□□□□ -0.12
PHF3-212ENST00000515594 PALM3A6NDB9 673 aaPredicted RBP14.32□□□□□ -0.12
PHF3-212ENST00000515594 NEK8Q86SG6 692 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 LRRC47Q8N1G4 583 aaKnown RBP14.32□□□□□ -0.12
PHF3-212ENST00000515594 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 MSL3Q8N5Y2 521 aaKnown RBP14.32□□□□□ -0.12
PHF3-212ENST00000515594 ERGIC2Q96RQ1 377 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 TSPYL1Q9H0U9 437 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 JRKLQ9Y4A0 524 aa14.32□□□□□ -0.12
PHF3-212ENST00000515594 BICDL2A1A5D9 508 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 EDIL3O43854 480 aa14.31□□□□□ -0.12
PHF3-212ENST00000515594 PCP11498 1178 aaKnown RBP14.31□□□□□ -0.12
PHF3-212ENST00000515594 CORO7P57737 925 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms