RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PPM1KQ8N3J5 372 aa14.47□□□□□ -0.09
TCOF1-214ENST00000515035 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-214ENST00000515035 HMGB1P1B2RPK0 211 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-214ENST00000515035 RPS8P62241 208 aaKnown RBP14.46□□□□□ -0.09
TCOF1-214ENST00000515035 PPARAQ07869 468 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 PDCLQ13371 301 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 CUL4AQ13619 759 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 ADCK5Q3MIX3 580 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 KAZNQ674X7 775 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 CDAN1Q8IWY9 1227 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 ANGPTL2Q9UKU9 493 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 SLMAPQ14BN4 828 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 USH1GQ495M9 461 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 KRT80Q6KB66 452 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 SCYL2Q6P3W7 929 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 TRIM42Q8IWZ5 723 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 PIP4K2CQ8TBX8 421 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 NEK9Q8TD19 979 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 EAF2Q96CJ1 260 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-214ENST00000515035 TUBB6Q9BUF5 446 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 YY1AP1Q9H869 796 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 ERVK-7P63135 1459 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 PDE1BQ01064 536 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 TMED2Q15363 201 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 ZNF449Q6P9G9 518 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 EMBQ6PCB8 327 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 CDKL2Q92772 493 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 C1orf112Q9NSG2 853 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 POLR3EQ9NVU0 708 aa14.46□□□□□ -0.09
TCOF1-214ENST00000515035 PPP6R2O75170 966 aa14.46□□□□□ -0.1
TCOF1-214ENST00000515035 TAF5LO75529 589 aa14.46□□□□□ -0.1
TCOF1-214ENST00000515035 CFBP00751 764 aa14.46□□□□□ -0.1
TCOF1-214ENST00000515035 YWHAEP62258 255 aaKnown RBP14.46□□□□□ -0.1
TCOF1-214ENST00000515035 ST13P4Q8IZP2 240 aaPredicted RBP14.46□□□□□ -0.1
TCOF1-214ENST00000515035 PCDHA12Q9UN75 941 aa14.46□□□□□ -0.1
TCOF1-214ENST00000515035 LONP1P36776 959 aaKnown RBP14.45□□□□□ -0.1
TCOF1-214ENST00000515035 LMNB2Q03252 620 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 FAM196AQ6ZSG2 479 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 CENPKQ9BS16 269 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 LSG1Q9H089 658 aaKnown RBP14.45□□□□□ -0.1
TCOF1-214ENST00000515035 GINS2Q9Y248 185 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.45□□□□□ -0.1
TCOF1-214ENST00000515035 RASGRF2O14827 1237 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 SAT1P21673 171 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 ADCY9O60503 1353 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 STAM2O75886 525 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 FTCDO95954 541 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 SMYD4Q8IYR2 804 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-214ENST00000515035 TEKT1Q969V4 418 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 YIPF3Q9GZM5 350 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 USP44Q9H0E7 712 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 ANLNQ9NQW6 1124 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 ATP8A2Q9NTI2 1148 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 MYO1FO00160 1098 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 PRPF6O94906 941 aaKnown RBP14.45□□□□□ -0.1
TCOF1-214ENST00000515035 LMNB1P20700 586 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 GARSP41250 739 aaKnown RBP14.45□□□□□ -0.1
TCOF1-214ENST00000515035 ARHGEF25Q86VW2 580 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 NLGN1Q8N2Q7 840 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 CCDC138Q96M89 665 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 CHD1O14646 1710 aa14.45□□□□□ -0.1
TCOF1-214ENST00000515035 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 SLC7A5Q01650 507 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 NBPF9Q3BBW0 867 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 EFHD1Q9BUP0 239 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 RCOR1Q9UKL0 485 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 MRFAP1Q9Y605 127 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 AATKQ6ZMQ8 1374 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 MOCS3O95396 460 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 NSFP46459 744 aaKnown RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 EIF3BP55884 814 aaKnown RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 RSBN1LQ6PCB5 846 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 LCA5Q86VQ0 697 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 TBK1Q9UHD2 729 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 INTUQ9ULD6 942 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 GAS7O60861 476 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 NDUFA10O95299 355 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 SCG2P13521 617 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 SLFNL1Q499Z3 407 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 NUGGCQ68CJ6 796 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 CC2D1AQ6P1N0 951 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 GOLGA8QA0A0J9YX86 632 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 GOLGA8OA6NCC3 632 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 GOLGA8NF8WBI6 632 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 PPIP5K2O43314 1243 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 CREB3O43889 395 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 TNKSO95271 1327 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 ECEL1O95672 775 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 ESRRAP11474 423 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 RXRBP28702 533 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 RSPH3Q86UC2 560 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 TRIM50Q86XT4 487 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 FAM178BQ8IXR5 827 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 GDAP1Q8TB36 358 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 ENOX1Q8TC92 643 aaKnown RBP14.44□□□□□ -0.1
TCOF1-214ENST00000515035 MAP4K1Q92918 833 aa14.44□□□□□ -0.1
TCOF1-214ENST00000515035 IL1RL1Q01638 556 aa14.43□□□□□ -0.1
TCOF1-214ENST00000515035 ZSCAN10Q96SZ4 725 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-214ENST00000515035 SAMSN1Q9NSI8 373 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms