RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 A0A0D9SFI3 127 aa26.86■■□□□ 1.89
SMAD1-214ENST00000514831 IQCF3P0C7M6 154 aa26.86■■□□□ 1.89
SMAD1-214ENST00000514831 LAMA4Q16363 1823 aa26.86■■□□□ 1.89
SMAD1-214ENST00000514831 COL4A4P53420 1690 aaPredicted RBP26.85■■□□□ 1.89
SMAD1-214ENST00000514831 AAK1Q2M2I8 961 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 MCMDC2Q4G0Z9 681 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 TICAM2Q86XR7 235 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 RETREG2Q8NC44 543 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 COPS5Q92905 334 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 FAM227BQ96M60 508 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 TTC14Q96N46 770 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 ZBTB47Q9UFB7 747 aaPredicted RBP26.85■■□□□ 1.89
SMAD1-214ENST00000514831 MTCH2Q9Y6C9 303 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 BDP1A6H8Y1 2624 aa26.85■■□□□ 1.89
SMAD1-214ENST00000514831 KIAA1217Q5T5P2 1943 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 TRIP12Q14669 1992 aaPredicted RBP26.84■■□□□ 1.89
SMAD1-214ENST00000514831 TRANK1O15050 2925 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 REV3LO60673 3130 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 B4DLN1 442 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 GTPBP6O43824 516 aaPredicted RBP26.84■■□□□ 1.89
SMAD1-214ENST00000514831 HSPD1P10809 573 aaKnown RBP26.84■■□□□ 1.89
SMAD1-214ENST00000514831 PCP11498 1178 aaKnown RBP26.84■■□□□ 1.89
SMAD1-214ENST00000514831 BMP1P13497 986 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 MRPL12P52815 198 aaKnown RBP26.84■■□□□ 1.89
SMAD1-214ENST00000514831 TFF2Q03403 129 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 BFSP2Q13515 415 aa26.84■■□□□ 1.89
SMAD1-214ENST00000514831 TXNP10599 105 aaKnown RBP26.83■■□□□ 1.89
SMAD1-214ENST00000514831 PDE1AP54750 535 aa26.83■■□□□ 1.89
SMAD1-214ENST00000514831 PPP1R13LQ8WUF5 828 aa26.83■■□□□ 1.89
SMAD1-214ENST00000514831 EPOPA6NHQ4 379 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 RFXAPO00287 272 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 BAIAP3O94812 1187 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 ARIH2O95376 493 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 HAND2P61296 217 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 SKIV2LQ15477 1246 aaKnown RBP26.82■■□□□ 1.88
SMAD1-214ENST00000514831 GPATCH4Q5T3I0 446 aaKnown RBP26.82■■□□□ 1.88
SMAD1-214ENST00000514831 ZNF589Q86UQ0 364 aaPredicted RBP26.82■■□□□ 1.88
SMAD1-214ENST00000514831 HERC6Q8IVU3 1022 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 RGS22Q8NE09 1264 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 NECAB3Q96P71 396 aaPredicted RBP26.82■■□□□ 1.88
SMAD1-214ENST00000514831 NOD1Q9Y239 953 aa26.82■■□□□ 1.88
SMAD1-214ENST00000514831 TAP1Q03518 808 aa26.81■■□□□ 1.88
SMAD1-214ENST00000514831 ANKRD45Q5TZF3 282 aa26.81■■□□□ 1.88
SMAD1-214ENST00000514831 FTOQ9C0B1 505 aaKnown RBP eCLIP26.81■■□□□ 1.88
SMAD1-214ENST00000514831 MAF1Q9H063 256 aa26.81■■□□□ 1.88
SMAD1-214ENST00000514831 CERS4Q9HA82 394 aa26.81■■□□□ 1.88
SMAD1-214ENST00000514831 MYH6P13533 1939 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 ARHGEF15O94989 841 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 KCNQ1P51787 676 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 USH1GQ495M9 461 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 CCDC62Q6P9F0 684 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 MFSD6Q6ZSS7 791 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 TBC1D10CQ8IV04 446 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 CCDC155Q8N6L0 562 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 CAGE1Q8TC20 777 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 RAPGEFL1Q9UHV5 662 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 CCDC171Q6TFL3 1326 aa26.8■■□□□ 1.88
SMAD1-214ENST00000514831 XIRP2A4UGR9 3374 aa26.79■■□□□ 1.88
SMAD1-214ENST00000514831 KIF28PB7ZC32 967 aa26.79■■□□□ 1.88
SMAD1-214ENST00000514831 NMIQ13287 307 aaPredicted RBP26.79■■□□□ 1.88
SMAD1-214ENST00000514831 SESTD1Q86VW0 696 aa26.79■■□□□ 1.88
SMAD1-214ENST00000514831 AFAP1L1Q8TED9 768 aa26.79■■□□□ 1.88
SMAD1-214ENST00000514831 MMP3P08254 477 aa26.78■■□□□ 1.88
SMAD1-214ENST00000514831 PTGISQ16647 500 aa26.78■■□□□ 1.88
SMAD1-214ENST00000514831 ARNTL2Q8WYA1 636 aa26.78■■□□□ 1.88
SMAD1-214ENST00000514831 CTAGE1Q96RT6 745 aa26.78■■□□□ 1.88
SMAD1-214ENST00000514831 RNF41Q9H4P4 317 aaPredicted RBP26.78■■□□□ 1.88
SMAD1-214ENST00000514831 COG5Q9UP83 839 aa26.78■■□□□ 1.88
SMAD1-214ENST00000514831 NEDD4P46934 1319 aa26.77■■□□□ 1.88
SMAD1-214ENST00000514831 GH1P01241 217 aa26.77■■□□□ 1.88
SMAD1-214ENST00000514831 ARHGAP1Q07960 439 aa26.77■■□□□ 1.88
SMAD1-214ENST00000514831 AFG1LQ8WV93 481 aa26.77■■□□□ 1.88
SMAD1-214ENST00000514831 ESR2Q92731 530 aa26.77■■□□□ 1.88
SMAD1-214ENST00000514831 ABCB11O95342 1321 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 GOLGA8HP0CJ92 632 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 KCNJ6P48051 423 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 RBL2Q08999 1139 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 CDC37Q16543 378 aaPredicted RBP26.76■■□□□ 1.87
SMAD1-214ENST00000514831 KRT40Q6A162 431 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 DGKHQ86XP1 1220 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 C1QTNF1Q9BXJ1 281 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 CPVLQ9H3G5 476 aa26.76■■□□□ 1.87
SMAD1-214ENST00000514831 TLL1O43897 1013 aa26.75■■□□□ 1.87
SMAD1-214ENST00000514831 NT5C2P49902 561 aa26.75■■□□□ 1.87
SMAD1-214ENST00000514831 CHMP4BP1P59074 171 aa26.75■■□□□ 1.87
SMAD1-214ENST00000514831 WDR5P61964 334 aaKnown RBP26.75■■□□□ 1.87
SMAD1-214ENST00000514831 GDF6Q6KF10 455 aaPredicted RBP26.75■■□□□ 1.87
SMAD1-214ENST00000514831 SYTL5Q8TDW5 730 aaPredicted RBP26.75■■□□□ 1.87
SMAD1-214ENST00000514831 KAT2BQ92831 832 aa26.75■■□□□ 1.87
SMAD1-214ENST00000514831 PARNO95453 639 aaKnown RBP26.74■■□□□ 1.87
SMAD1-214ENST00000514831 SELPP16109 830 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 GRB10Q13322 594 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 LY6KQ17RY6 165 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 LRRC8DQ7L1W4 858 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 NSUN6Q8TEA1 469 aaKnown RBP26.74■■□□□ 1.87
SMAD1-214ENST00000514831 ZKSCAN3Q9BRR0 538 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 UBA5Q9GZZ9 404 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 COL20A1Q9P218 1284 aa26.74■■□□□ 1.87
SMAD1-214ENST00000514831 CASTP20810 708 aaKnown RBP26.73■■□□□ 1.87
SMAD1-214ENST00000514831 MFAP1P55081 439 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms