RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	PRKAB1	Q9Y478	270 aa		4.91	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	STXBP3	O00186	592 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MYO1B	O43795	1136 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CP	P00450	1065 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DBH	P09172	617 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IBSP	P21815	317 aa	Predicted RBP	4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TAF7L	Q5H9L4	462 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	EEPD1	Q7L9B9	569 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LDHD	Q86WU2	507 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	JMY	Q8N9B5	988 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MMP19	Q99542	508 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SLK	Q9H2G2	1235 aa	Predicted RBP	4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CNTD2	Q9H8S5	307 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CYP26B1	Q9NR63	512 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FAN1	Q9Y2M0	1017 aa		4.9	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CDC45	O75419	566 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SASH1	O94885	1247 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	GLI4	P10075	376 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	AFF3	P51826	1226 aa	Known RBP	4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CDR1	P51861	262 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	KCNAB2	Q13303	367 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PTPRO	Q16827	1216 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CNKSR3	Q6P9H4	555 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LCNL1	Q6ZST4	164 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	HOMER1	Q86YM7	354 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DCP2	Q8IU60	420 aa	Known RBP	4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TRIM59	Q8IWR1	403 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FAM178B	Q8IXR5	827 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SH3TC2	Q8TF17	1288 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	APPBP2	Q92624	585 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FGD4	Q96M96	766 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DNAJC7	Q99615	494 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	AP5M1	Q9H0R1	490 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IRF2BPL	Q9H1B7	796 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SUSD2	Q9UGT4	822 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PCDHB10	Q9UN67	800 aa		4.89	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	KRTAP4-8	A0A0G2JLE6	195 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PPP1R12A	O14974	1030 aa	Predicted RBP	4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	KCNH1	O95259	989 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	EFEMP2	O95967	443 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	NCAM1	P13591	858 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PI3	P19957	117 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	HOXC12	P31275	282 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CEBPA	P49715	358 aa	Predicted RBP	4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	GALK1	P51570	392 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LARP1B	Q659C4	914 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SYNPO	Q8N3V7	929 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	USP33	Q8TEY7	942 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	THAP3	Q8WTV1	239 aa	Predicted RBP	4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	COPS5	Q92905	334 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	NKX2-4	Q9H2Z4	354 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	NGRN	Q9NPE2	291 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TMEM260	Q9NX78	707 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LRP2BP	Q9P2M1	347 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	NOP58	Q9Y2X3	529 aa	Known RBP	4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PCDHA5	Q9Y5H7	936 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IRS2	Q9Y4H2	1338 aa		4.88	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	hCG_2014768	A0A024R1R8	64 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IQCA1L	A6NCM1	817 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CCDC85C	A6NKD9	419 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267		F8W031	263 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	BUB1B	O60566	1050 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DNAJC6	O75061	913 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	EPHB3	P54753	998 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	IGBP1	P78318	339 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TESK1	Q15569	626 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CHRNA2	Q15822	529 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DPY19L1	Q2PZI1	675 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MTERF2	Q49AM1	385 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	C2orf27A	Q580R0	203 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	MROH9	Q5TGP6	573 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	GTF2IRD2B	Q6EKJ0	949 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	TTLL10	Q6ZVT0	673 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	C16orf86	Q6ZW13	317 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	GTF2IRD2	Q86UP8	949 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LILRB2	Q8N423	598 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	CPA5	Q8WXQ8	436 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	PPP1R14A	Q96A00	147 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DACT3	Q96B18	629 aa	Predicted RBP	4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SGPP1	Q9BX95	441 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ZCCHC4	Q9H5U6	513 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	KCNK12	Q9HB15	430 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SPC25	Q9HBM1	224 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	LUC7L	Q9NQ29	371 aa	Known RBP	4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ST7	Q9NRC1	585 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	FANCL	Q9NW38	375 aa		4.87	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	RBAK-RBAKDN	I3L0D1	243 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	DDAH1	O94760	285 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	GJB6	O95452	261 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SCG5	P05408	212 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SDHB	P21912	280 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SLC6A11	P48066	632 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ANAPC15	P60006	121 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	RPL11	P62913	178 aa	Known RBP	4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	ZNF200	P98182	395 aa	Predicted RBP	4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SCRN1	Q12765	414 aa		4.86	□□□□□ -1.63
CALCOCO2-223	ENST00000514267	SSPN	Q14714	243 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms