RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 KRT2P35908 639 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 NUCB2P80303 420 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 BLIDQ8IZY5 108 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 REXO1Q8N1G1 1221 aaKnown RBP11.62□□□□□ -0.55
NEDD9-214ENST00000513989 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 CLEC4DQ8WXI8 215 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 AIFM3Q96NN9 605 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 PHF20Q9BVI0 1012 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 FOXP1Q9H334 677 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-214ENST00000513989 PRO3102Q9H379 93 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 PAK6Q9NQU5 681 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-214ENST00000513989 KCNJ14Q9UNX9 436 aa11.62□□□□□ -0.55
NEDD9-214ENST00000513989 CCDC194A0A1B0GVG4 234 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 DTNBO60941 627 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 SGPL1O95470 568 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 PTPREP23469 700 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 FOSBP53539 338 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 UBXN2AP68543 259 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-214ENST00000513989 MUM1L1Q5H9M0 696 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
NEDD9-214ENST00000513989 GPR142Q7Z601 462 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 DPP9Q86TI2 863 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 DAGLBQ8NCG7 672 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 PORCNQ9H237 461 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 ZSCAN16Q9H4T2 348 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-214ENST00000513989 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
NEDD9-214ENST00000513989 GJD2Q9UKL4 321 aa11.61□□□□□ -0.55
NEDD9-214ENST00000513989 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 NFIBO00712 420 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 HSD17B4P51659 736 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 RPS6P62753 249 aaKnown RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 GUCY1B3Q02153 619 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 TRIM32Q13049 653 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 AP3B2Q13367 1082 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 ARHGEF16Q5VV41 709 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 USP17L6PQ6QN14 398 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 KRT25Q7Z3Z0 450 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 DIS3L2Q8IYB7 885 aaKnown RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 NSUN6Q8TEA1 469 aaKnown RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 SOCS4Q8WXH5 440 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 NUDT12Q9BQG2 462 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 CRISPLD2Q9H0B8 497 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 ATP6V1DQ9Y5K8 247 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 MYH4Q9Y623 1939 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 COL11A1P12107 1806 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-214ENST00000513989 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
NEDD9-214ENST00000513989 BTBD18B2RXH4 712 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 MEIS2O14770 477 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 GHRHRQ02643 423 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 BRAPQ7Z569 592 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 FCHSD1Q86WN1 690 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 DNERQ8NFT8 737 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 DEFB118Q96PH6 123 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 IWS1Q96ST2 819 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 PCDHA6Q9UN73 950 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
NEDD9-214ENST00000513989 PCDHA8Q9Y5H6 950 aa11.59□□□□□ -0.55
NEDD9-214ENST00000513989 LOC102724159A0A0B4J2E5 919 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 ASB14A6NK59 587 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-214ENST00000513989 U2AF2P26368 475 aaKnown RBP eCLIP11.58□□□□□ -0.565e-7■■□□□ 13.9
NEDD9-214ENST00000513989 ADORA2AP29274 412 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 ZNF76P36508 570 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 RGS2P41220 211 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 GRB14Q14449 540 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 NONOQ15233 471 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEDD9-214ENST00000513989 PWP2Q15269 919 aaKnown RBP11.58□□□□□ -0.56
NEDD9-214ENST00000513989 UBE2SQ16763 222 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 XRRA1Q6P2D8 792 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 NOSTRINQ8IVI9 506 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 TRMT44Q8IYL2 757 aaKnown RBP11.58□□□□□ -0.56
NEDD9-214ENST00000513989 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 DPF3Q92784 378 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 NAP1L4Q99733 375 aaKnown RBP11.58□□□□□ -0.56
NEDD9-214ENST00000513989 CHMP5Q9NZZ3 219 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 A0A0C4DFX4 3053 aa11.58□□□□□ -0.56
NEDD9-214ENST00000513989 OPLAHO14841 1288 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
NEDD9-214ENST00000513989 TRAPPC10P48553 1259 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
NEDD9-214ENST00000513989 USP11P51784 963 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 MORN1Q5T089 497 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms