RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 KLF18A0A0U1RQI7 1052 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 GOLGA8AA7E2F4 631 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 GOLGA8BA8MQT2 603 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 DNM1LO00429 736 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 FARP2O94887 1054 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 TFRCP02786 760 aaKnown RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 RARBP10826 455 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 EN2P19622 333 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 EDNRBP24530 442 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 CCND3P30281 292 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 METAP2P50579 478 aaKnown RBP eCLIP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 ALDH5A1P51649 535 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 HSD17B4P51659 736 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 BAATQ14032 418 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 POTEGQ6S5H5 508 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 Q6ZUG5 572 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 UBE2Q1Q7Z7E8 422 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 HOMER1Q86YM7 354 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 CCDC144CPQ8IYA2 1237 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 ARRDC4Q8NCT1 418 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 BRF1Q92994 677 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 PIGSQ96S52 555 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 IWS1Q96ST2 819 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 MYL10Q9BUA6 226 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 HTATIP2Q9BUP3 242 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 LRRC2Q9BYS8 371 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 CPVLQ9H3G5 476 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 VTA1Q9NP79 307 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-210ENST00000513957 FAM184BQ9ULE4 1060 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
NEDD4-210ENST00000513957 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 PIK3CDO00329 1044 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 SNAI1O95863 264 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 ZNF865P0CJ78 1059 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 CNGA1P29973 690 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 CNTN2Q02246 1040 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 ACVR2BQ13705 512 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 C8orf34Q49A92 452 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 SLC30A10Q6XR72 485 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 NECAB2Q7Z6G3 386 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 NSUN6Q8TEA1 469 aaKnown RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 ZNF274Q96GC6 653 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 GLT8D2Q9H1C3 349 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 UPF2Q9HAU5 1272 aaKnown RBP9.45□□□□□ -0.9
NEDD4-210ENST00000513957 VAT1LQ9HCJ6 419 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 BRPF3Q9ULD4 1205 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 CNTNAP5Q8WYK1 1306 aa9.45□□□□□ -0.9
NEDD4-210ENST00000513957 PDE4DIPQ5VU43 2346 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 NKRFO15226 690 aaKnown RBP eCLIP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 PPP1R11O60927 126 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 DUSP11O75319 330 aaKnown RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 STAM2O75886 525 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 POLR2MP0CAP2 368 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 CALML3P27482 149 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 CST5P28325 142 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 NKX3-2P78367 333 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 SLC35G1Q2M3R5 365 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 CPLX2Q6PUV4 134 aaKnown RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 RNF180Q86T96 592 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 TRPV1Q8NER1 839 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 SYTL5Q8TDW5 730 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 CCDC12Q8WUD4 166 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 CUL5Q93034 780 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 RNF26Q9BY78 433 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 KATNBL1Q9H079 304 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 PCDH10Q9P2E7 1040 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
NEDD4-210ENST00000513957 Q9Y3F1 56 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 ASTN1O14525 1302 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
NEDD4-210ENST00000513957 MYH7BA7E2Y1 1941 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 KBTBD13C9JR72 458 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 OPLAHO14841 1288 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 CFBP00751 764 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 IFNAR1P17181 557 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 RXRAP19793 462 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 APOBRQ0VD83 1088 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 FUT2Q10981 343 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 TOB2Q14106 344 aaPredicted RBP9.43□□□□□ -0.9
NEDD4-210ENST00000513957 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 ARHGEF16Q5VV41 709 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 MCTP2Q6DN12 878 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 IQSEC1Q6DN90 963 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 XRRA1Q6P2D8 792 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 KCNV1Q6PIU1 500 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 RMDN3Q96TC7 470 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
NEDD4-210ENST00000513957 UPF3BQ9BZI7 483 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms