RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 LTBP2Q14767 1821 aa22.51■■□□□ 1.19
SMAD1-211ENST00000512019 XBP1P17861 261 aa22.5■■□□□ 1.19
SMAD1-211ENST00000512019 NAPAP54920 295 aa22.5■■□□□ 1.19
SMAD1-211ENST00000512019 TDHQ8IZJ6 230 aa22.5■■□□□ 1.19
SMAD1-211ENST00000512019 FAM177A1Q8N128 213 aaPredicted RBP22.5■■□□□ 1.19
SMAD1-211ENST00000512019 CCDC148Q8NFR7 591 aa22.5■■□□□ 1.19
SMAD1-211ENST00000512019 UBE2OQ9C0C9 1292 aaKnown RBP22.5■■□□□ 1.19
SMAD1-211ENST00000512019 SH3GLB2Q9NR46 395 aa22.5■■□□□ 1.19
SMAD1-211ENST00000512019 SMCHD1A6NHR9 2005 aa22.5■■□□□ 1.19
SMAD1-211ENST00000512019 STXBP3O00186 592 aa22.49■■□□□ 1.19
SMAD1-211ENST00000512019 FDPSP14324 419 aaKnown RBP22.49■■□□□ 1.19
SMAD1-211ENST00000512019 TAL1P17542 331 aaPredicted RBP22.49■■□□□ 1.19
SMAD1-211ENST00000512019 MDM2Q00987 491 aaPredicted RBP22.49■■□□□ 1.19
SMAD1-211ENST00000512019 ANO1Q5XXA6 986 aa22.49■■□□□ 1.19
SMAD1-211ENST00000512019 ALG1Q9BT22 464 aa22.49■■□□□ 1.19
SMAD1-211ENST00000512019 STRNO43815 780 aa22.48■■□□□ 1.19
SMAD1-211ENST00000512019 ATN1P54259 1190 aaPredicted RBP22.48■■□□□ 1.19
SMAD1-211ENST00000512019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMAD1-211ENST00000512019 MCF2L2Q86YR7 1114 aa22.48■■□□□ 1.19
SMAD1-211ENST00000512019 MAF1Q9H063 256 aa22.48■■□□□ 1.19
SMAD1-211ENST00000512019 MSCO60682 206 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 DTNBO60941 627 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 GJB2P29033 226 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 TRIM29Q14134 588 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 KCTD2Q14681 263 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 LRIT3Q3SXY7 679 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 MUM1L1Q5H9M0 696 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 PRAMEF19Q5SWL8 479 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 GJC2Q5T442 439 aaPredicted RBP22.47■■□□□ 1.19
SMAD1-211ENST00000512019 OLFML2BQ68BL8 750 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 Q7L0L9 218 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 CLEC4DQ8WXI8 215 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 GLT8D2Q9H1C3 349 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 VPS54Q9P1Q0 977 aa22.47■■□□□ 1.19
SMAD1-211ENST00000512019 ESYT2A0FGR8 921 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 NFIBO00712 420 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 FCER1AP12319 257 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 TEX2Q8IWB9 1127 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 SAMD3Q8N6K7 520 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 RGS22Q8NE09 1264 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 AIFM3Q96NN9 605 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 MMP19Q99542 508 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 RBM19Q9Y4C8 960 aaKnown RBP22.46■■□□□ 1.19
SMAD1-211ENST00000512019 COL6A3P12111 3177 aa22.46■■□□□ 1.19
SMAD1-211ENST00000512019 DNM1LO00429 736 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 ADCY7P51828 1080 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 NSMFQ6X4W1 530 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 ABRAQ8N0Z2 381 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 ANKRD35Q8N283 1001 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 CUL5Q93034 780 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 PSTPIP2Q9H939 334 aa22.45■■□□□ 1.18
SMAD1-211ENST00000512019 CALML3P27482 149 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 GNA11P29992 359 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 TYW1BQ6NUM6 668 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 RNF207Q6ZRF8 634 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 MAML3Q96JK9 1138 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 C8orf76Q96K31 380 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 ZMYND12Q9H0C1 365 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 C6orf50Q9HD87 102 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 A1CFQ9NQ94 594 aaKnown RBP22.44■■□□□ 1.18
SMAD1-211ENST00000512019 FOXD4L1Q9NU39 408 aa22.44■■□□□ 1.18
SMAD1-211ENST00000512019 MAP3K20Q9NYL2 800 aaKnown RBP22.44■■□□□ 1.18
SMAD1-211ENST00000512019 SMCO2A6NFE2 343 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 GCOM1H8Y6P7 765 aaPredicted RBP22.43■■□□□ 1.18
SMAD1-211ENST00000512019 OPLAHO14841 1288 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 CFBP00751 764 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 POLR2MP0CAP2 368 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 MRPL12P52815 198 aaKnown RBP22.43■■□□□ 1.18
SMAD1-211ENST00000512019 RTP1P59025 263 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 NLRP5P59047 1200 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 GHRHRQ02643 423 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 GALNT17Q6IS24 598 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 DEFB123Q8N688 67 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 BICD2Q8TD16 824 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 RIC8AQ9NPQ8 531 aa22.43■■□□□ 1.18
SMAD1-211ENST00000512019 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
SMAD1-211ENST00000512019 SEPT4O43236 478 aa22.42■■□□□ 1.18
SMAD1-211ENST00000512019 GPR153Q6NV75 609 aa22.42■■□□□ 1.18
SMAD1-211ENST00000512019 CYP39A1Q9NYL5 469 aa22.42■■□□□ 1.18
SMAD1-211ENST00000512019 PIK3CDO00329 1044 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 MYCNP04198 464 aaPredicted RBP22.41■■□□□ 1.18
SMAD1-211ENST00000512019 PGK2P07205 417 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 PDCP20941 246 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 HSD17B4P51659 736 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 FOSBP53539 338 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 RPS6P62753 249 aaKnown RBP22.41■■□□□ 1.18
SMAD1-211ENST00000512019 SLC30A10Q6XR72 485 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 SLC17A8Q8NDX2 589 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 PHF20Q9BVI0 1012 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 BRMS1Q9HCU9 246 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 SLC5A4Q9NY91 659 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 ATP11BQ9Y2G3 1177 aa22.41■■□□□ 1.18
SMAD1-211ENST00000512019 BAATQ14032 418 aaPredicted RBP22.4■■□□□ 1.18
SMAD1-211ENST00000512019 DAGLBQ8NCG7 672 aa22.4■■□□□ 1.18
SMAD1-211ENST00000512019 ARRDC4Q8NCT1 418 aa22.4■■□□□ 1.18
SMAD1-211ENST00000512019 PCDHA4Q9UN74 947 aa22.4■■□□□ 1.18
SMAD1-211ENST00000512019 KCNJ14Q9UNX9 436 aa22.4■■□□□ 1.18
SMAD1-211ENST00000512019 POTEB2H3BUK9 544 aa22.39■■□□□ 1.17
SMAD1-211ENST00000512019 SAFBQ15424 915 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMAD1-211ENST00000512019 LARP1BQ659C4 914 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms