RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SRRTQ9BXP5 876 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CBX8Q9HC52 389 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF215Q9UL58 517 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZBTB12Q9Y330 459 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAH2Q9P225 4427 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 H7C1D1 291 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PCCAP05165 728 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC175P0C221 793 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPM1FP49593 454 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 KCNMA1Q12791 1236 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 SPP2Q13103 211 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 RRP1BQ14684 758 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATXN2LQ8WWM7 1075 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TOX2Q96NM4 488 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 USP28Q96RU2 1077 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ENAMQ9NRM1 1142 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLSCR3Q9NRY6 295 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 AGO1Q9UL18 857 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 NAP1L2Q9ULW6 460 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 NDUFB9Q9Y6M9 179 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLC27A2O14975 620 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PFKFB2O60825 505 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 EDN1P05305 212 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 GJA8P48165 433 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CLCN6P51797 869 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 MLLT6P55198 1093 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 MARSP56192 900 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PFKPQ01813 784 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 TBC1D8BQ0IIM8 1120 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 FLIIQ13045 1269 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 FXNQ16595 210 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ODF2Q5BJF6 829 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PAPD7Q5XG87 772 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 LHX8Q68G74 356 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC70Q6NSX1 233 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC191Q8NCU4 936 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZNF385DQ9H6B1 395 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC134Q9H6E4 229 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 PLSCR2Q9NRY7 297 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 SMC4Q9NTJ3 1288 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 NME7Q9Y5B8 376 aa1.93□□□□□ -2.1
TRAPPC13-211ENST00000512009 RAI1Q7Z5J4 1906 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TM4SF5O14894 197 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRIM66O15016 1216 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATG7O95352 703 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 HOXB9P17482 250 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TDO2P48775 406 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PSMD2Q13200 908 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CTR9Q6PD62 1173 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RPAP2Q8IXW5 612 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RASSF8Q8NHQ8 419 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 FAM212AQ96EL1 285 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC43Q96MW1 224 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 LNPKQ9C0E8 428 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 LY9Q9HBG7 655 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 GDPD2Q9HCC8 539 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 INCENPQ9NQS7 918 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CHMP5Q9NZZ3 219 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 SEPT10Q9P0V9 454 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 URB1O60287 2271 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 MYO18AQ92614 2054 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 GOLGA4Q13439 2230 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 COL1A2P08123 1366 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAJC25-GNG10A0A024R161 153 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 I6L893 689 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 HRO43593 1189 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRIM37O94972 964 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 F13A1P00488 732 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ATP5JP18859 108 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TNFRSF8P28908 595 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 MARCKSP29966 332 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 SHC2P98077 582 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 IKZF1Q13422 519 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 HABP4Q5JVS0 413 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 LMOD2Q6P5Q4 547 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PI16Q6UXB8 463 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ANKRD18AQ8IVF6 992 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 FTSJ3Q8IY81 847 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ABRAQ8N0Z2 381 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DENND1AQ8TEH3 1009 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DDX21Q9NR30 783 aaKnown RBP eCLIP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 BLOC1S4Q9NUP1 217 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PCDHA4Q9UN74 947 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 ANKRD11Q6UB99 2663 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CROCCQ5TZA2 2017 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 M0R2C6 588 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RNMTO43148 476 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 PHF14O94880 888 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 AMHP03971 560 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 HOXA7P31268 230 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 RBM10P98175 930 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC173Q0VFZ6 552 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 TTI2Q6NXR4 508 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAJC14Q6Y2X3 702 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 LIMS2Q7Z4I7 341 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CACTIN-AS1Q8N1I8 211 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 OXER1Q8TDS5 423 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 FGF11Q92914 225 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNAJC19Q96DA6 116 aa1.92□□□□□ -2.1
TRAPPC13-211ENST00000512009 CFAP53Q96M91 514 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms