RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CCDC117Q8IWD4 279 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 THNSL1Q8IYQ7 743 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 KBTBD3Q8NAB2 608 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 RASSF8Q8NHQ8 419 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NEDD1Q8NHV4 660 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 BADQ92934 168 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 PHKBQ93100 1093 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NXPE3Q969Y0 559 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ADPGKQ9BRR6 497 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 MTA3Q9BTC8 594 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 APOL6Q9BWW8 343 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 PRDM6Q9NQX0 595 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 HOMER2Q9NSB8 354 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 TCP11L1Q9NUJ3 509 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ZNF532Q9HCE3 1301 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 FER1L6Q2WGJ9 1857 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 WTIPA6NIX2 430 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 IFIT3O14879 490 aaKnown RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 TRAPPC3O43617 180 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 KDM4AO75164 1064 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CENPBP07199 599 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 FGFR2P21802 821 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 DNAJB2P25686 324 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CTNNB1P35222 781 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 PFKPQ01813 784 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 WTAPQ15007 396 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 TRIM60Q495X7 471 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 STXBP4Q6ZWJ1 553 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 C11orf74Q86VG3 221 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 MYOCDQ8IZQ8 938 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NCOA7Q8NI08 942 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 SSH3Q8TE77 659 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 SH3RF3Q8TEJ3 882 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ATP6V0A1Q93050 837 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CHAMP1Q96JM3 812 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 RPS6KC1Q96S38 1066 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 GDF15Q99988 308 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 MXD3Q9BW11 206 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 PUS3Q9BZE2 481 aaKnown RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 WDR11Q9BZH6 1224 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 USP44Q9H0E7 712 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 SEMA6BQ9H3T3 888 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NGRNQ9NPE2 291 aaKnown RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 EHD2Q9NZN4 543 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CXXC1Q9P0U4 656 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NCDNQ9UBB6 729 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ZMYM5Q9UJ78 669 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 DDX41Q9UJV9 622 aaKnown RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NOL7Q9UMY1 257 aaKnown RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NOP58Q9Y2X3 529 aaKnown RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 SAMM50Q9Y512 469 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CASP8AP2Q9UKL3 1982 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CAPN8A6NHC0 703 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 RSPH10B2B2RC85 870 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 DPYSL4O14531 572 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 DCXO43602 365 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 XYLBO75191 536 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 RSPH10BP0C881 870 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CYP2C19P33261 490 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 NRLP54845 237 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 GJA9P57773 515 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 PTK7Q13308 1070 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 GPM6BQ13491 265 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CAMK2BQ13554 666 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 TMEM266Q2M3C6 531 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 MTERF2Q49AM1 385 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 MCMDC2Q4G0Z9 681 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 FAM83BQ5T0W9 1011 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ARMCX2Q7L311 632 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 DGKHQ86XP1 1220 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 UBALD2Q8IYN6 164 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 CERS5Q8N5B7 392 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ANKRD44Q8N8A2 993 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 GMCL1P1Q8NEA9 526 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 TCP11Q8WWU5 503 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ATG4CQ96DT6 458 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 MAML3Q96JK9 1138 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 ALG1Q9BT22 464 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 SLKQ9H2G2 1235 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-209ENST00000511124 SQORQ9Y6N5 450 aa3.25□□□□□ -1.89
CLOCK-209ENST00000511124 COL5A3P25940 1745 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-209ENST00000511124 TTLL13PA6NNM8 815 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 M0R2C6 588 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 ATP2A1O14983 1001 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 LGR5O75473 907 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 NBPF7P0C2Y1 421 aaPredicted RBP3.24□□□□□ -1.89
CLOCK-209ENST00000511124 COL6A1P12109 1028 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 EEF2P13639 858 aaKnown RBP3.24□□□□□ -1.89
CLOCK-209ENST00000511124 SFPQP23246 707 aaKnown RBP eCLIP3.24□□□□□ -1.89
CLOCK-209ENST00000511124 RHBDL3P58872 404 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 FMR1Q06787 632 aaKnown RBP eCLIP3.24□□□□□ -1.89
CLOCK-209ENST00000511124 ANKRD45Q5TZF3 282 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 DIEXFQ68CQ4 756 aaKnown RBP3.24□□□□□ -1.89
CLOCK-209ENST00000511124 LRSAM1Q6UWE0 723 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 GLB1LQ6UWU2 654 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 CCDC83Q8IWF9 413 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 TSPYL6Q8N831 410 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 GMCL1Q96IK5 515 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 HAUS7Q99871 368 aa3.24□□□□□ -1.89
CLOCK-209ENST00000511124 DBNDD2Q9BQY9 259 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms