RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RTP1P59025 263 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 SCRN1Q12765 414 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 RNF207Q6ZRF8 634 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 NECAB1Q8N987 351 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 KLHDC9Q8NEP7 349 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 MORC4Q8TE76 937 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
SH3TC1-220ENST00000511002 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 ZBTB5O15062 677 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 CTAGE5O15320 804 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 PPFIA3O75145 1194 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 ST3GAL1Q11201 340 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 NTRK3Q16288 839 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 TAPT1Q6NXT6 567 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 SLC39A5Q6ZMH5 540 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 RRP36Q96EU6 259 aaKnown RBP17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 PHF24Q9UPV7 400 aa17.96■□□□□ 0.47
SH3TC1-220ENST00000511002 OPLAHO14841 1288 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 DTNBO60941 627 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 TRIM60Q495X7 471 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 RNF180Q86T96 592 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 FBXO11Q86XK2 927 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 PHKBQ93100 1093 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 GTF3C6Q969F1 213 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 DNAH12Q6ZR08 3092 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 ABCB11O95342 1321 aa17.95■□□□□ 0.46
SH3TC1-220ENST00000511002 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 C6orf222P0C671 652 aaPredicted RBP17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 SMPD1P17405 629 aa17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 SYTL5Q8TDW5 730 aaPredicted RBP17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 GDF15Q99988 308 aa17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 UPF3AQ9H1J1 476 aaKnown RBP17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 SEC63Q9UGP8 760 aaKnown RBP17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 GNEQ9Y223 722 aaKnown RBP17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 ATP11BQ9Y2G3 1177 aa17.94■□□□□ 0.46
SH3TC1-220ENST00000511002 A0A1W2PQ45 241 aaPredicted RBP17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 A0A1W2PQY0 241 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 IFNAR1P17181 557 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 GJA9P57773 515 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 BEX3Q00994 111 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 TNFAIP2Q03169 654 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 SNX17Q15036 470 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 KCNA10Q16322 511 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 TAAR1Q96RJ0 339 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 AMNQ9BXJ7 453 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 SLC26A6Q9BXS9 759 aa17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 ADD3Q9UEY8 706 aaKnown RBP17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
SH3TC1-220ENST00000511002 CPLX1O14810 134 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 CTDNEP1O95476 244 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 EDNRBP24530 442 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 MAGEA10P43363 369 aaPredicted RBP17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 ACLYP53396 1101 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 CCDC83Q8IWF9 413 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 VTA1Q9NP79 307 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 PCDHA1Q9Y5I3 950 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 LTBP2Q14767 1821 aa17.92■□□□□ 0.46
SH3TC1-220ENST00000511002 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 HEATR3Q7Z4Q2 680 aa17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 SH3RF1Q7Z6J0 888 aa17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 TLK2Q86UE8 772 aa17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 ZSCAN31Q96LW9 406 aaPredicted RBP17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 TSEN34Q9BSV6 310 aaKnown RBP17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 MRPL11Q9Y3B7 192 aaKnown RBP17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 RANBP2P49792 3224 aaKnown RBP17.91■□□□□ 0.46
SH3TC1-220ENST00000511002 DYNC1LI2O43237 492 aaPredicted RBP17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 CFBP00751 764 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 ASGR1P07306 291 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 NKX3-2P78367 333 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 MDM2Q00987 491 aaPredicted RBP17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 TLE2Q04725 743 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 GNASQ5JWF2 1037 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 WWC2Q6AWC2 1192 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 DNERQ8NFT8 737 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 SH2B1Q9NRF2 756 aaPredicted RBP17.9■□□□□ 0.46
SH3TC1-220ENST00000511002 RBM47A0AV96 593 aaKnown RBP17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 JAK2O60674 1132 aa17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 CDKL5O76039 1030 aa17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 SCG2P13521 617 aa17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 HOXA13P31271 388 aaPredicted RBP17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 MCM2P49736 904 aa17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 PDE4DQ08499 809 aa17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 SSRP1Q08945 709 aaKnown RBP17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 PKN1Q16512 942 aa17.89■□□□□ 0.45
SH3TC1-220ENST00000511002 PFKFB3Q16875 520 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms