RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ALDH5A1P51649 535 aaPredicted RBP16.97■□□□□ 0.31
RNF4-213ENST00000509388 MFSD14CQ5VZR4 134 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 ZNF467Q7Z7K2 595 aaPredicted RBP16.97■□□□□ 0.31
RNF4-213ENST00000509388 DIS3L2Q8IYB7 885 aaKnown RBP16.97■□□□□ 0.31
RNF4-213ENST00000509388 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
RNF4-213ENST00000509388 DAGLBQ8NCG7 672 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 SHISA4Q96DD7 197 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 COL20A1Q9P218 1284 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 CCDC194A0A1B0GVG4 234 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 MYCLP12524 364 aaPredicted RBP16.96■□□□□ 0.31
RNF4-213ENST00000509388 PDE4DQ08499 809 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
RNF4-213ENST00000509388 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 SLAIN1Q8ND83 568 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 RASGRP4Q8TDF6 673 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 PXYLP1Q8TE99 480 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 IWS1Q96ST2 819 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 TINF2Q9BSI4 451 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 PXMP2Q9NR77 195 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 PTCH2Q9Y6C5 1203 aa16.96■□□□□ 0.31
RNF4-213ENST00000509388 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
RNF4-213ENST00000509388 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
RNF4-213ENST00000509388 CLK2P49760 499 aaKnown RBP16.95■□□□□ 0.3
RNF4-213ENST00000509388 STXBP2Q15833 593 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 CCL14Q16627 93 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 OLFML2BQ68BL8 750 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 KRT25Q7Z3Z0 450 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 PGBD1Q96JS3 809 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
RNF4-213ENST00000509388 MYH6P13533 1939 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 NR3C2P08235 984 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 ELNP15502 786 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 CCND2P30279 289 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 GRK4P32298 578 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 ZNF76P36508 570 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 UBXN2AP68543 259 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 NONOQ15233 471 aaKnown RBP eCLIP16.94■□□□□ 0.36e-7■■■□□ 19.2
RNF4-213ENST00000509388 FBXO46Q6PJ61 603 aaPredicted RBP16.94■□□□□ 0.3
RNF4-213ENST00000509388 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 ARMCX2Q7L311 632 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 OXER1Q8TDS5 423 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 PDCD2LQ9BRP1 358 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 SYNGAP1Q96PV0 1343 aa16.94■□□□□ 0.3
RNF4-213ENST00000509388 HMGCRP04035 888 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 SYT1P21579 422 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 CYP2C19P33261 490 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 NR5A1Q13285 461 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 PGM5Q15124 567 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 NPY5RQ15761 445 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 XRRA1Q6P2D8 792 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 PIK3AP1Q6ZUJ8 805 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 TRIB2Q92519 343 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 FOXP1Q9H334 677 aaPredicted RBP16.93■□□□□ 0.3
RNF4-213ENST00000509388 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
RNF4-213ENST00000509388 FLRT1Q9NZU1 646 aa16.93■□□□□ 0.3
RNF4-213ENST00000509388 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 STX6O43752 255 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 EIF3JO75822 258 aaKnown RBP16.92■□□□□ 0.3
RNF4-213ENST00000509388 EEPD1Q7L9B9 569 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 VSIG10LQ86VR7 867 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 TBCKQ8TEA7 893 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 FGD4Q96M96 766 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 ABHD16BQ9H3Z7 469 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 ZHX1Q9UKY1 873 aaPredicted RBP16.92■□□□□ 0.3
RNF4-213ENST00000509388 ASTN1O14525 1302 aa16.92■□□□□ 0.3
RNF4-213ENST00000509388 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 PCNTO95613 3336 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 M0R2N6 131 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 STAM2O75886 525 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 SREBF1P36956 1147 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 ARHGAP4P98171 946 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 PCNX4Q63HM2 1172 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 RTEL1Q9NZ71 1219 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 RPTORQ8N122 1335 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
RNF4-213ENST00000509388 CASP8AP2Q9UKL3 1982 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
RNF4-213ENST00000509388 INHAP05111 366 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 PRKAR2AP13861 404 aaKnown RBP16.9■□□□□ 0.3
RNF4-213ENST00000509388 EDNRBP24530 442 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 USP11P51784 963 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 ACVR2BQ13705 512 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 INF2Q27J81 1249 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 NOSTRINQ8IVI9 506 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 MORC4Q8TE76 937 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 SH3TC2Q8TF17 1288 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
RNF4-213ENST00000509388 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 NRBP1Q9UHY1 535 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
RNF4-213ENST00000509388 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
RNF4-213ENST00000509388 ZSWIM8A7E2V4 1837 aa16.9■□□□□ 0.3
RNF4-213ENST00000509388 FRMPD4Q14CM0 1322 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms