RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MYH6P13533 1939 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 C3orf80F5H4A9 247 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 RBAK-RBAKDNI3L0D1 243 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 DTNBO60941 627 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 ICAM1P05362 532 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 ZKSCAN1P17029 563 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 RGS2P41220 211 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 NT5C2P49902 561 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 CCNA1P78396 465 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 ST3GAL1Q11201 340 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 TOB2Q14106 344 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 WTAPQ15007 396 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 ASPRV1Q53RT3 343 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 PRAMEF19Q5SWL8 479 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 PPP2R2DQ66LE6 453 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 RALYLQ86SE5 291 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 SGMS1Q86VZ5 419 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 ABRAQ8N0Z2 381 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 CMTR1Q8N1G2 835 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 IL17RAQ96F46 866 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 JAKMIP1Q96N16 626 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 MMP19Q99542 508 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 AGXT2Q9BYV1 514 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 MROH8Q9H579 483 aa8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 ISY1Q9ULR0 285 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-207ENST00000509162 PFASO15067 1338 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 DDAH1O94760 285 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 SLC25A27O95847 323 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 SNAI1O95863 264 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 ZNF865P0CJ78 1059 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 ALAS1P13196 640 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 HOXD10P28358 340 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 CDC27P30260 824 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 GJA8P48165 433 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 OLFML2BQ68BL8 750 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 APOA5Q6Q788 366 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 KIAA1211Q6ZU35 1233 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 TMTC3Q6ZXV5 915 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 CCDC144CPQ8IYA2 1237 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 SRBD1Q8N5C6 995 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 NLRP7Q8WX94 980 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 NEK1Q96PY6 1258 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 PIGSQ96S52 555 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 KIF2CQ99661 725 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 RIOX1Q9H6W3 641 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 ACAD9Q9H845 621 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 CYP39A1Q9NYL5 469 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 CCPG1Q9ULG6 757 aa8.41□□□□□ -1.06
TOPBP1-207ENST00000509162 hCG_1642624A0A1W2PR95 340 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 MYADML2A6NDP7 307 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 KLRF2D3W0D1 207 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 ZBED4O75132 1171 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 LARGE1O95461 756 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 GJB1P08034 283 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 PARP1P09874 1014 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 RPS6KB1P23443 525 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 MCM5P33992 734 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 LIFRP42702 1097 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 GHRHRQ02643 423 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 KCNC4Q03721 635 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 APOBRQ0VD83 1088 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 IKQ13123 557 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 TUSC1Q2TAM9 212 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 USH1GQ495M9 461 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 GPATCH4Q5T3I0 446 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 ANO1Q5XXA6 986 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 MICU3Q86XE3 530 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 CHST13Q8NET6 341 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 IL31RAQ8NI17 732 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 U2AF1L4Q8WU68 220 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 CHURC1Q8WUH1 139 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 TMEM87BQ96K49 555 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 DEFB118Q96PH6 123 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 TRERF1Q96PN7 1200 aa8.4□□□□□ -1.06
TOPBP1-207ENST00000509162 PDE4DIPQ5VU43 2346 aa8.4□□□□□ -1.07
TOPBP1-207ENST00000509162 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 CTAGE5O15320 804 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 FCER1AP12319 257 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 EDNRBP24530 442 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 TRDNQ13061 729 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 MAMDC4Q6UXC1 1216 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 Q6ZUG5 572 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 DHX32Q7L7V1 743 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 HOMER1Q86YM7 354 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 MORC4Q8TE76 937 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 NUP133Q8WUM0 1156 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 MTA3Q9BTC8 594 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 RNF208Q9H0X6 261 aa8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 LAMA2P24043 3122 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-207ENST00000509162 LTBP2Q14767 1821 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 FRMPD4Q14CM0 1322 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 RPTORQ8N122 1335 aa8.38□□□□□ -1.07
TOPBP1-207ENST00000509162 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms